Gene Gmet_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0084 
Symbol 
ID3739410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp103670 
End bp105166 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content65% 
IMG OID637777362 
Producthypothetical protein 
Protein accessionYP_383058 
Protein GI78221311 
COG category[S] Function unknown 
COG ID[COG3863] Uncharacterized distant relative of cell wall-associated hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00246514 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000370561 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGCGCA TCACCGTTGC CGTGCTGCTC ATGGCTGCCC TCCTCTCACC CTTCACAGCC 
CTGGCCCAGC GCCAGGCGGC CTGCCGCGAG CACCTTGCCG CGGCCCACAG CGGTGGCCGG
GCGGCGGTGA ACCAATCCCT CGCCAAGGAA ATGACTGCTT TCCGGACCCT GGCGGAACGG
GCCCTGGCAC TCCGGGCCGA GACCATCAAG GTGGGAAATT CTGTCCACGC CAAAGTGGAC
CAGGGCAAAC CCCTTACCGG CGATGACATC GCACTTCTCA ACCAGGGGAT CACCGAGCAC
CTGACCCTGC GGGACGAGAT GCTGGCCGTG GCCGAGAGCC ACGAATGCTG GCTCGATGCC
TCGACCGCCG AACTCAGCAA GGCCGGCATC ACCGATGAGG CCCGTCTCAA GGGGGTGATG
GTATCCCTGG CCTCGGCCCT GGTCCTCTAT GACAACTACC TCCTTGCGGT CTCCCTCTTT
GAGGGGGACG CCAAGCTGCG CCGCATCCTC AATGAAAAAG ATCCCGGCTA TGCCGTGACC
CGCGCCGCCC TCTCGAAGGT CACCCTCAAC TACAACTCCA TCGCCAACCG GCAGCGGGTC
CGGCGGGCCA TCTCGTTCTT CGAGAGCGAA TCAAAGAAGC ACCCGGCCCT CCTCCGCGAC
GGCGCGGAAA CCTCCTACCT CGCCACCCTC ATCGCCCAGA GCCCCTCGTA CACCATGGTC
GAGAAGGTAT CGCCCCTCTA CGTTATCGGC CGCAAGCTGG GCTTCCTGGG GGCCGCCACC
ACCGACACCC TCACCGTAAT GGAGCGGGAA GGGGTCAACG TCTTCAGCAT GCTCTTCGGC
AACGCGGTGG GGCTGGTGGA GACCCGCAAG GGGAAGCTGG CCCTGCGGGG CGACGTGGCG
CATGATGTTT CGGCAACCCT CAGGTCCGGC GACATCCTCC TGGAGAAGAC CCCCTTCCGG
CTCACCGACA AGCTCATTCC CGGTTACTGG GGTCATGCGG CGGTCTGGAT CGGCAGCGAG
GCGGAGCTGA AGGAGCTGGG GATCTGGGAC AATCCCGTGG TGGCCCGCCA CCACGGGGAG
ATCCGTGAGG GACGGCTCGT GGTGGAGGCC CTCCGTTCCG GGGTGGAGAT GAACACACTG
GAACACTTCA TGAACGTGGA CAGCCTCGGC ATCCTGCGCA AGGCCGCCGC CGGCCGGGAC
GAGCGGGGGC GGATCATCAT CCAGGCCCTG CGCCAGGTGG GCAAGCCCTA CGACTTCAAC
TTCGACGTGG AATCCAAGGA GCGGGTCTAC TGCTCCAAGC TGGTTTACCT CTCCTACAGC
GGCATCGACT GGCCCACGAA AAAGTCCCTG GGAAGGGCCA CCTTCAGCCC CGACGACGTG
GCTGTCCGCG CCTTCAAGGG TGGCGACCTG CAATTGGTCA CCTTCTACCA CGACGGTAAA
CCGGTCAGCG ACCGGCCCGC AGTCCGCATG GCGGAGCTGA TGCGGGTGCG GGAGTAG
 
Protein sequence
MRRITVAVLL MAALLSPFTA LAQRQAACRE HLAAAHSGGR AAVNQSLAKE MTAFRTLAER 
ALALRAETIK VGNSVHAKVD QGKPLTGDDI ALLNQGITEH LTLRDEMLAV AESHECWLDA
STAELSKAGI TDEARLKGVM VSLASALVLY DNYLLAVSLF EGDAKLRRIL NEKDPGYAVT
RAALSKVTLN YNSIANRQRV RRAISFFESE SKKHPALLRD GAETSYLATL IAQSPSYTMV
EKVSPLYVIG RKLGFLGAAT TDTLTVMERE GVNVFSMLFG NAVGLVETRK GKLALRGDVA
HDVSATLRSG DILLEKTPFR LTDKLIPGYW GHAAVWIGSE AELKELGIWD NPVVARHHGE
IREGRLVVEA LRSGVEMNTL EHFMNVDSLG ILRKAAAGRD ERGRIIIQAL RQVGKPYDFN
FDVESKERVY CSKLVYLSYS GIDWPTKKSL GRATFSPDDV AVRAFKGGDL QLVTFYHDGK
PVSDRPAVRM AELMRVRE