Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0073 |
Symbol | gatB |
ID | 3739689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 89602 |
End bp | 91041 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637777351 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_383047 |
Protein GI | 78221300 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.228943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTACC AAGCCGTCAT CGGCCTTGAA GTCCACGTCC AGCTGAAAAC CGACACCAAG ATCTTCTGCG GCTGCTCCAC CCAGTTCGGT GCCAGCCCCA ACTCCCAGAC CTGCCCGGTC TGCCTCGGGA TGCCCGGCGC CCTGCCGGTC CTGAACCGGA AGGTGGTGGA GTTCGCCATC AAGGCCGGTC TCGCCACCAA CTGCCGGATC GCGCCGCGCA GCGTCTTCGC CCGGAAGAAC TACTTCTACC CGGACCTCCC CAAGGGGTAC CAGATCAGCC AGTTCGAACT CCCCATCTGC CAGAACGGCC ACCTGGACAT CGAGGTGGAG GGTGAGACTA AGCGGATCGG CATCACCCGC ATCCACATGG AGGAGGACGC CGGCAAGCTG GTCCACAGCG ACATCCCCGG CCTGGGAAGC GGCTCCGGGG TGGACCTGAA CCGGGCCTGC ACGCCGCTCC TGGAAATCGT GTCGGAGCCG GACATCCGCA GCGCCGACGA AGCGGTGGCC TACCTGAAGA AGCTCCATCA GATCGTGGTC TACCTCGGCA TCTGCGACGG GAACATGGAG GAGGGGAGCT TCCGCTGCGA CGCCAACGTG TCGGTGATGC CGGTGGGCTC CACGACTTTC GGGACCCGCA CCGAGACCAA GAACGTCAAC TCCTTCCGCT TCGTGAAACA GGCCATCGAG TACGAGATCG AGCGGCAGAT CGAGCTCATC GAGGAGGGGG GGAAGGTGGT CCAGGAGACC CGCCTCTTCA ACCCGGACAG CGGCGAAACC CGCTCCATGC GCGGCAAGGA GGAGGCCCAC GACTACCGCT ACTTCCCCGA TCCCGATCTC GTGCCGCTCG TCATCTCCAA CGACTGGGTG GCCGACGTGG CCCTGTCGCT CCCCGAACTC CCCGAGGCCC GGCGCAATCG CTACCGCTCC GACTTGGGGC TTTCCGACTA CGACGCCGAG GTCCTGACCG CGACGCGGGA AATGGCCGAG TACTTCGAAG CGTGCCTCGC CGCCGGCGCC CCGGCCAAGG GGGCCGCCAA CTGGGTGATG GGTGAGGTGA CTCGCTCCCT CAACGAGGCG GGCACGGGAA TCGCCGACTG CCCGGTGACG CCGGAGCGCC TCACGGCCCT GCTCCAGCTC ATCGAGAAGG GGACCATCTC GGGCAAAATC GCCAAGACCG TCTTCGACGA GATGTGGACG AACGACAAGG CCCCCGAGGC CATCGTGGAG GAGAAGGGGC TCGTCCAGGT CTCCGACACC GGCGCCATCG AGAAGATCAT CGACGAGATC ATGGCCGCCA ACATGGGGCA GGTGGAGGAG TTCCGCGGCG GCAAGGAGAA GGTCTTCGGC TTCTTCGTGG GGCAGGTGAT GCGGGCCTCC AAGGGGAAGG CGAACCCGGC GGTGGTGAAC GAGCTGTTAC TGAAGAAGCT CAAGGGGTGA
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Protein sequence | MNYQAVIGLE VHVQLKTDTK IFCGCSTQFG ASPNSQTCPV CLGMPGALPV LNRKVVEFAI KAGLATNCRI APRSVFARKN YFYPDLPKGY QISQFELPIC QNGHLDIEVE GETKRIGITR IHMEEDAGKL VHSDIPGLGS GSGVDLNRAC TPLLEIVSEP DIRSADEAVA YLKKLHQIVV YLGICDGNME EGSFRCDANV SVMPVGSTTF GTRTETKNVN SFRFVKQAIE YEIERQIELI EEGGKVVQET RLFNPDSGET RSMRGKEEAH DYRYFPDPDL VPLVISNDWV ADVALSLPEL PEARRNRYRS DLGLSDYDAE VLTATREMAE YFEACLAAGA PAKGAANWVM GEVTRSLNEA GTGIADCPVT PERLTALLQL IEKGTISGKI AKTVFDEMWT NDKAPEAIVE EKGLVQVSDT GAIEKIIDEI MAANMGQVEE FRGGKEKVFG FFVGQVMRAS KGKANPAVVN ELLLKKLKG
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