| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0064 |
|---|
| Symbol | |
|---|
| ID | 3739680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 78552 |
|---|
| End bp | 79322 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637777342 |
|---|
| Product | xylose isomerase-like TIM barrel |
|---|
| Protein accession | YP_383038 |
|---|
| Protein GI | 78221291 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATT GCGTCTATGC CCACGTCCCC TATTCGATGC TGGCGGCAAA CCTGCCAGCC
ATTATCTCCC GGCGTATCAA CCCGGAGATA TTTTTTTCCG GCGATACCCT CGATACCCTC
GTCCCCGAGG AAGTGGGCGC AATCGCCGGG CAGCTGGCCG AGGCGGGGCT CCGCTGTACC
TTCCACGGGG CCTTTATCGA CCTGAATCCC GGGTCGGTGG AGCGCCTCAT CCGCGAGGCG
ACCATGCACC GCTTCGGGCA GGTGCTGGAT GCGGCGCAAA TCCTCAAACC CGACGTCATC
GTCTTCCATC CGGGATACGA CAAGTGGCGC TATGGTGAGA GCCAGGACAA GTGGCTTGCC
CACAGCATTG TCGCGTGGCG GCAGGTGCTT GAGCGGACCG ACTCCCTCGG CACCACCATC
GCAGTGGAGA ACATCTTCGA GGAGGAGCCG TCGACCCTGA AGGCGCTTTT TGAGGCAATC
GACCACCCCC GTCTGCGGCA CTGCTTCGAC GTGGGGCACT GGAACCTGTT CCACACCGTG
GGGATGGAGG AGTGGTTCGC CGAACTGGGC TCTTTCGTGG CCGAGGCCCA TATCCACGAC
AATTTCGGCA AACGGGATGA CCACCTACCC CTTGGGGAGG CAGCCATCGA CTTTGACCTC
TTTTTCTCCC TCATGGAGCG TTACGCCCCC GGCGCCGCGT GGACCATCGA GGCCCATTGC
CGCGACGCCC TCGACCGGGC GCTGGTCGCC ATCGAGAAAT ACCGCACGTG A
|
|---|
| Protein sequence | MSNCVYAHVP YSMLAANLPA IISRRINPEI FFSGDTLDTL VPEEVGAIAG QLAEAGLRCT
FHGAFIDLNP GSVERLIREA TMHRFGQVLD AAQILKPDVI VFHPGYDKWR YGESQDKWLA
HSIVAWRQVL ERTDSLGTTI AVENIFEEEP STLKALFEAI DHPRLRHCFD VGHWNLFHTV
GMEEWFAELG SFVAEAHIHD NFGKRDDHLP LGEAAIDFDL FFSLMERYAP GAAWTIEAHC
RDALDRALVA IEKYRT
|
|---|
| |