| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0059 |
|---|
| Symbol | ispF |
|---|
| ID | 3738547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 73856 |
|---|
| End bp | 74329 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637777337 |
|---|
| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| Protein accession | YP_383033 |
|---|
| Protein GI | 78221286 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG GGCACGGCTA CGACGTCCAT TGCCTCGTGG AGGGGCGGAA ACTGATTCTC
GGAGGAGTTG ATGTTCCCTA CGAACGGGGG CTTTTGGGAC ACTCGGACGC CGACGTCCTC
CTCCATGCCA TCGCCGACGC CATCCTCGGG GCGTTGGCCC TTGGGGACAT CGGGAAGCAC
TTCCCCGACA CCGACCCCCA GTTCAAGGGG GCCGACAGCC GCAAGCTCCT GCGCCACGTC
ATGGCCCTGG CCGGCCAGAA GGGATATGTC CTCGGCAACG TGGATGCCAC CATCGTGGCC
CAGCGCCCCA AGCTGGCTCC CTTCATCCCG GAGATGCGCG CGAATCTCGC CGAAGACCTC
ATCGCTGAGA TCGATCGGAT CAACGTCAAG GCCACTACCA CCGAGCAACT CGGCTTTGCC
GGCCGAGGCG AGGGAATCGC CGCTTATGCG GTGGTCCTCA TGGAGCGCAG GTAG
|
|---|
| Protein sequence | MRIGHGYDVH CLVEGRKLIL GGVDVPYERG LLGHSDADVL LHAIADAILG ALALGDIGKH
FPDTDPQFKG ADSRKLLRHV MALAGQKGYV LGNVDATIVA QRPKLAPFIP EMRANLAEDL
IAEIDRINVK ATTTEQLGFA GRGEGIAAYA VVLMERR
|
|---|
| |