| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0043 |
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| Symbol | |
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| ID | 3738531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 55674 |
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| End bp | 57416 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637777322 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_383018 |
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| Protein GI | 78221271 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGAT CACGGAAGAT CGTCAGCGCC CGGGAGCTGG ACCTCCTGCG CCGCCTTCTC
CGGGAACGGA CCGAGGAGCT GGAGCGGGCC AACGAGCGCC TCTTCATGGC CACCCAGGTG
AAATCCGAAT TCCTCTCCCA CATGTCCCGG GAGTTCCAGC GACCCCTGGA CCGCATCGTC
GACTTCGCCT CCTGCCTCCG GGACGGCGCC ATGGGGGAGG TGAACCCCGA GCAGCGGAGT
GGCCTCGACG CCATCGTCAT ACGGGGGATG CGGCTCCAGC GGATGCTGCA GCGGGTCCTG
GAACTCTGCA GCAGCGATCT GGGGATGGCG GTCTTTCTTC CCAAGGAGTT TCCCGTCGAG
GATGCCCTTG AGCGGGTGGT GAAGCGACTG CGGGAGAGGG CCGAGAAACA GGGTGTGGCC
ATCGATGCCG GCTGCGTTGA TGGGGGAACC CTCCTGGCCG ACGAAGGGAA GTTCTCCTTC
ATTATTGAAG AGTTGGCCAC AAATGCCCTC AAGTTTTCAC CCCGGGGGTC ACGGATCACG
GTGCGCCTGC GGAACGTGAC CGGAGGCCGG GAGGAGCGGT TTCTGGAAGT GGCGGTTTCC
GACCAGGGGC CGGGTATCCG GGAGGAGGAG CTGGGGCAGA TCTTCAAGAG CTTCGAGATG
GGGAGCGGCG CGATTGCCAG CCCCGGAAGC CTCGGGCTCG GGCTCGCCCT GGTGAAGCAC
TTCGTGGATC TTCACGGGGG GAGGATATCC GTCGAGAGTC AGGCCGGGGA GGGGAGTTCT
TTCACCGTTC TCCTCCCCAA GGGTGGTCCC TCGGTTCGCA TGGTCCGCAC GCCCCGGGTC
CTCGTGGCCG GTCTGGAGGA GGACTTCGCG GGGCCTCTTC TTTCGCGGCT ACGGGACGAA
GGGTATGAAA CCATCACTGC CGGCGGCGGT CAGGACGCCC TGGACAAGGG GATTTCCATG
GCCCCGGACC TCTGCATTCT GAGCCTCTCC CTCCCCGAAG TGGGAGGGAT CGACGTCTGC
CTGCGACTCA AGGCGCACGA ACGGAGCAAG CAGATCCCGG TCATTATCAC CGCCCCCTAT
CCTGACCGCT CGGCCAAGGT GGGAAGCGCC CAGGCGGGGG CCGACGGTTT TTTCGCCCTC
CCGGCCGAAA CGGAGGAGCT CTTCCTCAAG GCCCGCAGCC TCATCGCCCA GAAGCTCAAT
TACGATTTCC TCAAGCGCAA TTACGAGATA GCCGCCAGCG AGGCGTTCAC CGATCCCCTT
ACCGGCCTCT TCAACCTGCG CCAGTTCTGG TTGAGCCTCG ACCACGAGCT GGCCCGGGCC
CGCCGCTACG GCAGGCACTG TTCCCTCGCC ATGATCGACA TCGATTTCTT CAAGCAGTAC
AACGACCGGC ACGGGCACCT GCGCGGCGAC GAGGTGCTGA AGGAGATCAG CAAGCTTTTC
GTTGCCAGCA TCAGGAACTC CGACATCGCG GCCCGCTACG GTGGAGAGGA GTTCGTGGTC
ATCATGCCTG AAACCGGCCG CGACCTGGCG CTCATCGCCG GGGAAAAGCT GAGGCGGGCC
GTGGCCGAGC ACCCCTTTTC CCTCCAGGAG ACCCAGCCGG GCGGTCTCCT CACGGTAAGC
GTCGGCATCG CCACCTTCCC CGACGACGCC GCGACGGCCC GGGAGATGGT GGATGCGGCG
GACCAGGCCC TCTACCGGGC CAAGGGGCTG GGAAGAGACC GGGTGGAGAG CCGTTCCCCG
TAG
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| Protein sequence | MAGSRKIVSA RELDLLRRLL RERTEELERA NERLFMATQV KSEFLSHMSR EFQRPLDRIV
DFASCLRDGA MGEVNPEQRS GLDAIVIRGM RLQRMLQRVL ELCSSDLGMA VFLPKEFPVE
DALERVVKRL RERAEKQGVA IDAGCVDGGT LLADEGKFSF IIEELATNAL KFSPRGSRIT
VRLRNVTGGR EERFLEVAVS DQGPGIREEE LGQIFKSFEM GSGAIASPGS LGLGLALVKH
FVDLHGGRIS VESQAGEGSS FTVLLPKGGP SVRMVRTPRV LVAGLEEDFA GPLLSRLRDE
GYETITAGGG QDALDKGISM APDLCILSLS LPEVGGIDVC LRLKAHERSK QIPVIITAPY
PDRSAKVGSA QAGADGFFAL PAETEELFLK ARSLIAQKLN YDFLKRNYEI AASEAFTDPL
TGLFNLRQFW LSLDHELARA RRYGRHCSLA MIDIDFFKQY NDRHGHLRGD EVLKEISKLF
VASIRNSDIA ARYGGEEFVV IMPETGRDLA LIAGEKLRRA VAEHPFSLQE TQPGGLLTVS
VGIATFPDDA ATAREMVDAA DQALYRAKGL GRDRVESRSP
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