Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0022 |
Symbol | |
ID | 3739599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 28317 |
End bp | 30281 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637777301 |
Product | hypothetical protein |
Protein accession | YP_382997 |
Protein GI | 78221250 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.308944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCACC GCCTCCACCT GGAACAGTTC GGCCCGGTTC ACGCCCTCCC CGTCCTCCAC TACCGGATGG AGTTCGCCTG GCTCGTGCGC GAGGCGGTGC ACCGGGTGAA GCCCGACTGC ATCGCCCTGG AGCTGCCGCC GACCCTGGAA GCACCCTTCC GGCGCGCCGT GGCACGGCTG CCGGAGGTGT CGGTGCTCCG CTACGGCACC AAGGTGAAGA AAGGGCACGA GGAAACGGTC TACCTCCTCG TGGAGCCGGC GGACCCCCTG GTGGAGGGGG CACGGCTCGG CCGGGAACTG GGGATCCCCG TGGCACTGGT GGACGTGGAT ACCGATTCCT ATCCCCTCCA CCACGAAGCG CTTCCCGACC CCTACGCCAT CCACCGGCTT GGCCTCACCC CCTACTACGA GGAGTACCGG AAGGGGTGCG CGACGCTCTC CCACGGTCCC GAGGACCGGC GGCGGGAGCA GGGGATGGCC TTCCGGCTCC AGGAGCTTTC CCGAGAGCAC GGCCTCATCC TTTTCATCTG CGGGATGTTC CATCTGGAGC GGGTGAAGGA GGAATTCGGC CGCCCCCAGG CCGCGCCCCT GGAACGGGTC CGGCGCGAGA ACGTGGCCCT CTTCAATCTC CACCCCGATT CCTGCCGAGA GATCCTCGGG GAGTTTCCTT TCCTCTCGGC AGTGTACGAG CTGCGCCGGG ACACTTTGCC ACCGGAGCCT GTAGACGGCA GTGCCACGCT GCGCAAACGG TATAGCGTAT TGGAACTGAT CGAGGGGGGG AAGCGGGAAA TCCCCGAGGA GGAGCTCCTG CGCCACGCCG TGGAGCGGAG CGCCCGCCAC ACGGGGCGGG AGGGGGAGTT TCCGGACCGG CAGCGGATCA TATACCATCT TTTCAAAGAG GCGGCCCGCC ACTACCGGCA GGAGACCGGC GAGCCGCTCC ACCTCTGGCA GAAGCGGGCC TTCTTCCGCT TTACCCGCAA CTACGCCTTG ACCGGCGGCA TGCTCCTCCC CGATCTCTTC CAGCTCCTAG CCGCGGCCCG CGGCTGCATC GACGACAACT TCGCCTACGC CTTCTGGCGC CTGGCCACCC ACTACCCCTG GCAGCGGACC GACGCCGACC TCCCTACCCT CGCCATCTCT CCCGAGGAAA TCTGGGGGGG CGCCCGCCGG ATCCGCTTCC GTCCCCGGCA GCAGCGGCAG AAGGGGCTGT CGCACCTGGG GTTCCTGAAG CGGAAGAAGG AGAAGCGCCC CGGCGAATGG CTGGAGGGGT TCGACAATCC CGCCATCTGC TCCTACCCGC CGGAGGACGT GGTGATCGAG GATTATGGCC GGTTCCTGAA GAAAAAGGGG GCCATGCAAC TCTCCGAGGA GCTCTCCCGC ACCGAGCCGT TCACGGCGTC GCTTCTGGAC GGGATCGACA TGCGGGAGAC CCTGCGCAAT CTGGCCGACG GCCGGATCTA CGTGCGGGAG AACCAGCGGG CCACGGGGGG CGTCGGCGGG GTGGTGGTGA TCTTTGACGA GGACCGGGAC AACCGCAGGT TCCCCTACCG GATGACCTGG CTCGGGGAGC ACGATCAGGA ATCGGACATG GCCTTTTACG CCACCTCCCC GGCCGACAAC ATCGTGGGCC CCGGCATCTG CCGCTGTGAG TACGGCGGCT TCCTCCTCTC CTACCCTCCC CGGCGCATGA TGGACGTCTG GCACGACCCG GACTACGCCT TTGCCCGCTC GAAAGCCGAG GTGCTCCTCC TGGCGGCCCT GGACTACTCC CCCGAGAAGC ACGTGGTCTA CGCGGCGCCC CGTCCCCCCC GGAGCATGTT CCGCCAGCTG GCGGCCCGCA TGGGGAAGAA GATCGTCTAC ATCCCCCTCG GCTCCCTGTC GCCGGTGAAG CTCAAGGGGC TGCGGGTCCT CCACATCCTC CATGGCCACG ACAAGCGGGA GATCGCGAAG AACTATGTCT GGTGA
|
Protein sequence | MPHRLHLEQF GPVHALPVLH YRMEFAWLVR EAVHRVKPDC IALELPPTLE APFRRAVARL PEVSVLRYGT KVKKGHEETV YLLVEPADPL VEGARLGREL GIPVALVDVD TDSYPLHHEA LPDPYAIHRL GLTPYYEEYR KGCATLSHGP EDRRREQGMA FRLQELSREH GLILFICGMF HLERVKEEFG RPQAAPLERV RRENVALFNL HPDSCREILG EFPFLSAVYE LRRDTLPPEP VDGSATLRKR YSVLELIEGG KREIPEEELL RHAVERSARH TGREGEFPDR QRIIYHLFKE AARHYRQETG EPLHLWQKRA FFRFTRNYAL TGGMLLPDLF QLLAAARGCI DDNFAYAFWR LATHYPWQRT DADLPTLAIS PEEIWGGARR IRFRPRQQRQ KGLSHLGFLK RKKEKRPGEW LEGFDNPAIC SYPPEDVVIE DYGRFLKKKG AMQLSEELSR TEPFTASLLD GIDMRETLRN LADGRIYVRE NQRATGGVGG VVVIFDEDRD NRRFPYRMTW LGEHDQESDM AFYATSPADN IVGPGICRCE YGGFLLSYPP RRMMDVWHDP DYAFARSKAE VLLLAALDYS PEKHVVYAAP RPPRSMFRQL AARMGKKIVY IPLGSLSPVK LKGLRVLHIL HGHDKREIAK NYVW
|
| |