Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0012 |
Symbol | |
ID | 3739914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 18680 |
End bp | 20365 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637777291 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_382987 |
Protein GI | 78221240 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.237401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGATT TGCACCTGAG GATACTGCTG GCGGAGGACT CCGAGGAGGA TGCCTTTCTG CTTCTGCGGG AGCTGGAACG GGGGGGATAC ACGGTGGAGT GCGAGCGGGT GCAGACCCGC TCCGCCATGA AAAAGGCCCT GGTCTCCCGG CAATGGGACA TGGTCATTTC CGACTACCGG ATGCCCCGGT TCTCCGCGCC CCAGGCCCTG GAAACCCTCA AGGAGAGCGG TCTCGACCTC CCCTTCATCA TCGTCTCCGG CAAGATCGCC GAGGATATGC TCGTGGATGC CATGCGGGCC GGCGCCAACG ACTACTTCAT GAAGGGGAAC CTGTCGCGGC TCATTCCTGC CATCGAGCGG GAGCTGCGGG AGGCTGCCGA GCGGCGCATC CGGCGCCGGG CCGAGCGGGC CATCCGCCAG GGGAAAATGG AGTGGGAGGC GGCTTTCGAC GCCGTGTCGG ACCTGGTCCT TCTCACCGAC CTCTACAGCA CGGTCATCCG CTGCAACAAC CGGGTCATCG AGGCCTTCAA CGCCACCTAC AGCGACATCC TGGGGAGGAA CATCACCGAG CTTTTCTACG GCAGCCCCGA CGCCGGGGAG AGCATTTTCG ATCAGTGCAC CGATCTGAAG GCCGATAACG GCGATGTCCG CTTTCCCAAA CTCACGGGAT GGTACAAGGC CTCCTGCTTT CCCATGCACC CTACCGAAAA CGAACACGGC TTCGTCTACG TCATCAAGGA CGTCACCAAG CGGAAAAAGA TGGAGGAAGA GAAGGAGCTG GCCACCCTGG AGCTTCTCCG GAGCCGCCAG GCCCTCAGGG AGAATCTGGA GGAGATGAAG CGGGCCAACA TGGAGCTGGG GCGCCTGAAC GCCGCCAAGA ACACCGTCAT CGGCATGGCC TCCCATGAAC TGAAGACCCC GCTTACCTCC ATCATCGGTG GGCTCCAGTT TCTCTTCCAC TACAGCGGCC TGGAGATGAC CCCGGAGCAG AAGGAGATGA TGGAGTCGGT CTACGAGGGG GTGACCCAGC TGCGGGGGAT CGTGGACGAT CTCCTCTCCA TCTCCCGCAT CGAGACCAAG GGATTCGCCG TCACCAAGCG GATGGTGAAC CTCCTCAATC TCTGCCGGGA GGTGCGCCAT ACCCTGCTCC TTCCCCTGTC GGAGCGGGAC ATCGAGCTCT CCATTGCCGA GGACACCTGC AGCATTCCGG CCGACGAGGG GTTCTGCCGG CTCGTGACCC GGAACCTCCT GGAGAACGCC ATCAAGTTCA CCGCCGACGG GGGACGGATC ACCATCAGCG GCGAGCTCAC CTCCCTGGAC GACCTCCTCC CCCAGGCCGA TTCGCTCCGC TGCTTCTACC GGGAGTTCCC CTCCAACATC GAGGGGCACC CTGCCTTCTA TCGCCTCGAC ATCGCCGACA CGGGAATCGG CATCCCCCCC GAGGAGCGGG TGCGGATCTT CGAGAAATTC TACGGCGTCG GCGACCTCGC CTACCACTCC TCCGGCAAGA CCGGCTTCAT GTCCAAGGGG TCAGGGCTCG GCCTCTCCAT CGTCAAGGGG ATCATGGACG CCCACGGCGG CATGGTCTGG GTGGGGCCCG GGGAAAACGG CTCGGGAAGC GTCTTCTCCC TCCTCTTCCC CATGGACAAC ACCTGTGTCA TCCCGCCCCG CGAAGGGAGA CGGTAG
|
Protein sequence | MDDLHLRILL AEDSEEDAFL LLRELERGGY TVECERVQTR SAMKKALVSR QWDMVISDYR MPRFSAPQAL ETLKESGLDL PFIIVSGKIA EDMLVDAMRA GANDYFMKGN LSRLIPAIER ELREAAERRI RRRAERAIRQ GKMEWEAAFD AVSDLVLLTD LYSTVIRCNN RVIEAFNATY SDILGRNITE LFYGSPDAGE SIFDQCTDLK ADNGDVRFPK LTGWYKASCF PMHPTENEHG FVYVIKDVTK RKKMEEEKEL ATLELLRSRQ ALRENLEEMK RANMELGRLN AAKNTVIGMA SHELKTPLTS IIGGLQFLFH YSGLEMTPEQ KEMMESVYEG VTQLRGIVDD LLSISRIETK GFAVTKRMVN LLNLCREVRH TLLLPLSERD IELSIAEDTC SIPADEGFCR LVTRNLLENA IKFTADGGRI TISGELTSLD DLLPQADSLR CFYREFPSNI EGHPAFYRLD IADTGIGIPP EERVRIFEKF YGVGDLAYHS SGKTGFMSKG SGLGLSIVKG IMDAHGGMVW VGPGENGSGS VFSLLFPMDN TCVIPPREGR R
|
| |