Gene Gmet_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0003 
SymbolrecF 
ID3739905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3041 
End bp4138 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content65% 
IMG OID637777282 
Productrecombination protein F 
Protein accessionYP_382978 
Protein GI78221231 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTGA CGAAGATCCA GATCAGTTCC TTCCGGAACA TCGCCGCGGC GGAGATCCGC 
TTCGACCGGC GCTTCAATGT CCTCCACGGC GCCAACGGCC AGGGGAAGAC CTCGGTCCTG
GAGGCCATCT ATCTCCTGGG GACCATGAAG TCGTTTCGCC TCGCCAAGAC CCCTGATCTT
GTCAGCTGGA ACACCCCCCA TGCGCTCCTG CGGGGATGGG CCGAGCGGGA CGGGGTCGGC
AGGGAGATCG CCCTCTACCT GGGGAAGGAA GGCCGCAAAG CGAGGGTCGA CCAGAAGCCG
GTGACCCGGC TCGCCGATTT CTTCGGCAAC GTGAACGCCG TGGTCTTCTC CCCCGAGGAG
ATCGCCATGG CCCGCAGCGG CCCGGACCTC CGGCGCCGCT ACCTGGACCG GGCCATCTTC
AGCGGAGATC TGGGGTACCT GCTCCTCCAC CACGAGTACC ACCGGCTCCT CAAGCAGCGC
AACGCCCTGC TGAAGCGGGG AAGCCGGGAA GGGCTCGATA TCTGGACCGG ACAGCTGGCC
GAAGCGGGTA CCCGGCTCAT GGTAAAGCGG ATGGGATACC TGGCCGAGAT AGAGCCGCTG
GTGCAACGGT TCTACCGGGA GATTGCCGGG GGCGAGGAAG AGGCGGGGCT TGCCTATCGT
CCCCACCTCA CTACCCCCGA CTTGGTGAGT CGGGAGGGAA CGGACGCGCT TCTGGCTCTC
TTCGGGGCCC ATGAGGCGGA GGAACTCCGC CGGGGAACCA CCGTGGTGGG CCCCCACCGG
GACGACGTGG ACTTCGTCCT GAACGGCCGG GTGATCCGCA CTCACGGCTC CCAGGGGCAA
CAGCGCAGCT TCGTCCTGGC CCTTAAGATG GCGGAGATCG AGTACCTGGA GCGGCTCAAC
GACGCCCCGC CGGTGCTGCT CCTGGACGAC ATCTCGTCGG AGCTGGATCC GCAGCGCAAC
GCGAATCTCA TGACCTTCCT CCGGGAAAAG CGGATGCAGG TTTTCATCAC CACCACCGAT
GTTTCAACCC TCCGCCTGGC GGGGATTGCA ACCCACGCGT CCTTCCACGT TTCACGTGGA
ACGGTGACGC CTTTATAG
 
Protein sequence
MFVTKIQISS FRNIAAAEIR FDRRFNVLHG ANGQGKTSVL EAIYLLGTMK SFRLAKTPDL 
VSWNTPHALL RGWAERDGVG REIALYLGKE GRKARVDQKP VTRLADFFGN VNAVVFSPEE
IAMARSGPDL RRRYLDRAIF SGDLGYLLLH HEYHRLLKQR NALLKRGSRE GLDIWTGQLA
EAGTRLMVKR MGYLAEIEPL VQRFYREIAG GEEEAGLAYR PHLTTPDLVS REGTDALLAL
FGAHEAEELR RGTTVVGPHR DDVDFVLNGR VIRTHGSQGQ QRSFVLALKM AEIEYLERLN
DAPPVLLLDD ISSELDPQRN ANLMTFLREK RMQVFITTTD VSTLRLAGIA THASFHVSRG
TVTPL