Gene Syncc9605_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2394 
Symbol 
ID3736635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2206247 
End bp2207155 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID637776983 
Productphytoene synthase 
Protein accessionYP_382681 
Protein GI78213902 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCG CCTCCCCGGA TCTCGACGCA GCCTTTGAGG CCTGCCGTCG GGAGACCGCC 
GAGTGGGCCA AGACGTTCTA TATCGGCACC TTGCTTCTCC CTCCAGAGAA GCGGCGTGCC
ATCTGGGCGA TTTATGTGTG GTGCCGGCGC ACCGATGAAC TGATGGACAG CCCGGAGGCC
CAGGCGCGTC CGGTTGAAGA ACTTGCTGAG CGGCTCGACC GCTGGGAGGA GAAGACCCGT
GCTCTTTTTG ATGGCCGGGT GGAGGATGAC CTGGATGCGG TGATGGTGGA CACCCTGGAG
CGCTTTCCCC AGGGCATACA GCCCTATCTC GACATGATTG AGGGCCAGCG GATGGACCTC
ACCTGGACCC GTTACCCCCG CTTTGAAGAC CTCAAGCTCT ATTGCTATCG CGTGGCAGGC
ACTGTTGGCT TGATGACCCA GGGGGTGATG GGTGTCGACC AGGCCTACAC CTCAGCCCCC
TGGAGCGACT GTCCCGACAC TTCCGATGCC GCCGTCTCCC TGGGGATCGC CAACCAACTC
ACCAACATCC TCCGGGATGT GGGGGAAGAC CGGGGCCGTG GTCGTATCTA TCTGCCGCAG
GAAGATCTCG AGCGTTTCGG CTATTCCGAG GAGGAGTTGA TGGCTGGAAC CCTCAACACC
GCCTGGCGTG CGTTGATGCG CTTTCAGCTG GAGCGGGCCC GCGATTGGTT TGCTCGCTCC
GAAGCAGGAG TCCGTTGGCT GTCTGCCGAT GCGCGCTGGC CGGTGTGGAC GTCGCTTCGG
CTCTACCGCG GCATCCTGGA TGAAATCGAG CGGGTCGATT ACGACGTGTT CAATCACCGT
GCCTACGTGG CCAAGGTCAA CAAGCTGCTT GATCTGCCCC GTTCATTCCT GTTGGCTCAG
TCACGCTAA
 
Protein sequence
MPLASPDLDA AFEACRRETA EWAKTFYIGT LLLPPEKRRA IWAIYVWCRR TDELMDSPEA 
QARPVEELAE RLDRWEEKTR ALFDGRVEDD LDAVMVDTLE RFPQGIQPYL DMIEGQRMDL
TWTRYPRFED LKLYCYRVAG TVGLMTQGVM GVDQAYTSAP WSDCPDTSDA AVSLGIANQL
TNILRDVGED RGRGRIYLPQ EDLERFGYSE EELMAGTLNT AWRALMRFQL ERARDWFARS
EAGVRWLSAD ARWPVWTSLR LYRGILDEIE RVDYDVFNHR AYVAKVNKLL DLPRSFLLAQ
SR