| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2375 |
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| Symbol | |
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| ID | 3736539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 2189051 |
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| End bp | 2190106 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637776963 |
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| Product | photosystem II D2 protein (photosystem q(a) protein) |
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| Protein accession | YP_382662 |
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| Protein GI | 78213883 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B))
[TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.116163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG CTGTAGGACG CGCGCCACAG CGGGGATGGT TTGACGTCCT CGATGACTGG
CTCAAGCGCG ACCGCTTCGT TTTTGTCGGC TGGTCCGGCA TTCTTCTCCT CCCAACGGCC
TACCTGGCCA TCGGTGGCTG GCTGACAGGC ACCACTTTTG TCACCTCCTG GTACACCCAC
GGCATTGCCT CGTCGTACCT GGAAGGTTGC AACTTCCTGA CCGCTGCTGT GTCCACCCCC
GCTGATGCGA TGGGTCACAG CCTGCTGCTG CTCTGGGGCC CTGAGGCTCA GGGCGACTTC
GTTCGCTGGT GTCAGCTCGG CGGCCTCTGG GCCTTCGTGG CTCTGCACGG CGCCTTCGCA
CTGATCGGCT TCATGCTCCG TCAGTTCGAG ATCGCTCGTC TGGTCGGCAT CCGCCCTTAC
AACGCCATCG CCTTCTCCGG TCCGATTGCG GTGTTCGTCA GTGTCTTCCT GATGTACCCC
CTCGGCCAGA GCAGCTGGTT CTTCGCGCCC TCCTTCGGTG TGGCTGCGAT CTTCCGCTTC
CTTCTCTTCC TTCAGGGCTT CCACAACTGG ACCCTGAACC CCTTCCACAT GATGGGCGTC
GCCGGCATCC TCGGCGGTGC ACTCCTCTGT GCTATTCACG GCGCCACCGT GGAAAACACC
CTGTTTGAGG ACGGTGAGCA GGCCAACACC TTCAAGGCGT TCGAGCCCAC TCAGGAAGAA
GAGACCTATT CCATGGTCAC CGCCAACCGC TTCTGGAGCC AGATCTTCGG TATCGCCTTC
TCCAACAAGC GCTGGCTGCA CTTCTTCATG CTGTTCGTGC CTGTGATGGG CCTATGGACC
AGCTCCATCG GCATCATTGG CCTGGCCCTC AACCTGCGCG CCTATGACTT CGTGTCCCAG
GAAATCCGCG CTGCAGAAGA TCCCGAATTC GAGACCTTCT ACACCAAGAA CATCCTTCTG
AATGAAGGTC TGCGTGCCTG GATGGCACCG GCTGACCAGC CGCACGAAAA CTTCGTCTTC
CCTGAAGAGG TTCTGCCACG CGGCAACGCC CTTTGA
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| Protein sequence | MTIAVGRAPQ RGWFDVLDDW LKRDRFVFVG WSGILLLPTA YLAIGGWLTG TTFVTSWYTH
GIASSYLEGC NFLTAAVSTP ADAMGHSLLL LWGPEAQGDF VRWCQLGGLW AFVALHGAFA
LIGFMLRQFE IARLVGIRPY NAIAFSGPIA VFVSVFLMYP LGQSSWFFAP SFGVAAIFRF
LLFLQGFHNW TLNPFHMMGV AGILGGALLC AIHGATVENT LFEDGEQANT FKAFEPTQEE
ETYSMVTANR FWSQIFGIAF SNKRWLHFFM LFVPVMGLWT SSIGIIGLAL NLRAYDFVSQ
EIRAAEDPEF ETFYTKNILL NEGLRAWMAP ADQPHENFVF PEEVLPRGNA L
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