Gene Syncc9605_2352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2352 
Symbol 
ID3736498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2164244 
End bp2165446 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID637776940 
Producthypothetical protein 
Protein accessionYP_382639 
Protein GI78213860 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.831558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCC TCTCGATGAT CGTGCGCGAT GAAGAAGCGC GTCTCGGGGA ATGTCTGGCC 
TCCGTGCAGG GCTTTGCTGA CGAGATGGTG GTGGTGGACA CCGGCTCCAC CGACGCCACG
GTGGCCATTG CCGAGGCGGC TGGAGCCCGG GTTGAACAGA TCAGCTGGCC GGGGGACTTC
GCTCCAGCCC GCAACCAGGC CCTGGAGTTT CTCAACGGTG ACTGGGTGCT GGTGCTGGAC
GCGGACGAGC AGCTTCGTGC TGAGGCCATC CCTGCACTCA AGGCCCTGAT GGCCCAGCCC
GATGTGCTGG TGATCAACCT GCTGCGCTAC GAGGTGGGGG CTGCCATGGC GCCCTATTCC
AGCGTCAGTC GTCTGTTCCG ACGCCACCCC TCGATCCGAT GGAGCCGGCC ATACCACTCA
ATGATCGACG ACAGCATTCG CGCCTTGCTG GAAACGGAAC CCCAATGGCG CATCGCCGAT
TGCAGTGAGC CAGCGATCCT CCACGACGGC TACCGACCGG AGCTGCTGGC GGGCAGCGAT
AAGGCCGATC GGCTGCGACA AGCCATGGAA GCTGATCTGC AGGAGCGGCC CGGTGATCCC
TACGCCAGCG CCAAGCTGGG GGGTCTGCTG ATCAGCGAAG GCAAGACCGA CCAAGCCATC
CCCCTGCTGC AGAGCGGCCT CAAGCAGTGC GGTAAGGCCG ATGCCGAACG TTATGAGCTG
CTGCTGCACC TGGGCTTGGC CCTCGCCCCC AGTGATCCCG TCCAGGCAGT GAGCTGCTAT
CGGCAAGCCC TGGAGATTCC CCTGGACACA CGGGTCAGTC TTGGAGCCCG CCTCAACCTG
GCGGCTCGAC TGATGGAACA GGGCAACCTA GAGGAAGCGA TTAGCCTCAC CCAAACCGCC
GCCCAGCGTG CACCGGAAGT GGCCCTCGCC TGGTACAACC TTGGGCTGAT GCAACGGCGG
CGCGGCGATC TCGCTGCGGC CCTGGAGGCC TACGGGCGCG CACTCGCCTT GGATCCCAAC
AACGCTGAGT GCCATCAGAA CAATGCTGTG GCCCAGCTTT TGGGCGGCAA CATCGACGCC
GCTCGCAGCA GCTTCATCCG CGCCATCAAG CTGCTTCAGG CGCAGGGCAG CACCAAAGCG
GCTGAGCAGC TGCGCGAGAG GGTGCAGGGG GTGGTGAAGC TGGACGGGGA GGCTGTCGCT
TGA
 
Protein sequence
MLSLSMIVRD EEARLGECLA SVQGFADEMV VVDTGSTDAT VAIAEAAGAR VEQISWPGDF 
APARNQALEF LNGDWVLVLD ADEQLRAEAI PALKALMAQP DVLVINLLRY EVGAAMAPYS
SVSRLFRRHP SIRWSRPYHS MIDDSIRALL ETEPQWRIAD CSEPAILHDG YRPELLAGSD
KADRLRQAME ADLQERPGDP YASAKLGGLL ISEGKTDQAI PLLQSGLKQC GKADAERYEL
LLHLGLALAP SDPVQAVSCY RQALEIPLDT RVSLGARLNL AARLMEQGNL EEAISLTQTA
AQRAPEVALA WYNLGLMQRR RGDLAAALEA YGRALALDPN NAECHQNNAV AQLLGGNIDA
ARSSFIRAIK LLQAQGSTKA AEQLRERVQG VVKLDGEAVA