| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2280 |
|---|
| Symbol | |
|---|
| ID | 3736222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 2088889 |
|---|
| End bp | 2090067 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637776864 |
|---|
| Product | Iron-regulated ABC transporter permease protein SufD |
|---|
| Protein accession | YP_382569 |
|---|
| Protein GI | 78213790 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.69897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.146878 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCA GTGTGCTGGC ACCGGTGCAA GAGCGCGGTC GAGCCGCGCT TGAACAGCTT
GGTCTGCCCA ACCGCCGCCA GGAGCCCTGG CGCCTCACCG ACCTCAAGCG GCTTGCGGCC
GTTTCGGAAT TGCCGGTCAG TGCCTCGCCA CCGTCCACGT CCCTGCCGGC CAGCCTGGAC
GGTGTGACCC GTCTGATGCT CAATGGTTTT GATGATCCCC TGGCCGGCCA GGTGCTTCCT
GAGGGAATCA CGGCGCTGAA CGCCGAAGAA CTCGAGCAGG CCCTCGGCCA CACCCTGGAT
CGCTGCGGTT GTGCCCAGGT CTGGCCCGTG GAGTTAAACC ATGCCAAAGC CCAGCAGATC
CTGGCCCTAA GGGTGCGGGG ACGGGTTGGC CCGTTGGAGC TGGTCCTGGC GGCGGGTGCC
GGGTTGAACG CCACGCGGGT GCTGCTGCTG TTGGAGGAAA AGGCAGAGCT TGAGCTGATG
CAGGTGCTGC TGGCAGAGGG GGCGTCGGCC CACAGTCATG TGCTGGAAGT TCATTTGGGG
CAGGAGGCCC AACTCCGCCA TGGCGTTCTG GCCACTGCAG ATGGGGTGTC ATCGCTGATG
GCCCATTTGG CCGTTGAGCA GGAGCCCCGC AGCTCCTATG CCCTCACTTC GGTGGTTCAG
GGCTGGAACC TGGGACGGGT GGAGCCCCGG GTGGTGCAGG TGGATGGCCA GGCAGAGACC
GTGCTTAAAG GTCTGGCTGT CACTGGCGCC AAGCAGCAGC TGGCCACCCA CACCGCCGTG
CGCTTCGACG GGCCGGAGGG GGAGCTGGAT CAATTGCAGA AATGCCTGGC CGGTGGGCAG
TCCCACGCGA TTTTTAACGG CGCCATCAGT GTTCCCCGCG ATGCGCAGCG CACCAATGCC
GCGCAGTTGA GCCGTAACCT GCTGCTGTCC GGCCGGGCCC GGGTGGACAC CAAACCTGAG
CTGGAGATCG TGGCAGACGA TGTGCGCTGC GCCCATGGCG CCACCGTGTC GCAGCTTCAG
GACGATGAGT TGTTCTATCT CCAGAGTCGG GGCATCGCTG CGGCGGATGC AACGGCGCTG
CTGCTGCGCG GTGCCTGTCA GGAGGTGATT GCCCAGCTTC CTGCTGCTGC GCAGGCCTGG
CGCCCCCTGG AGCGCGTGAT GGAGAGTCTC GCCCCATGA
|
|---|
| Protein sequence | MASSVLAPVQ ERGRAALEQL GLPNRRQEPW RLTDLKRLAA VSELPVSASP PSTSLPASLD
GVTRLMLNGF DDPLAGQVLP EGITALNAEE LEQALGHTLD RCGCAQVWPV ELNHAKAQQI
LALRVRGRVG PLELVLAAGA GLNATRVLLL LEEKAELELM QVLLAEGASA HSHVLEVHLG
QEAQLRHGVL ATADGVSSLM AHLAVEQEPR SSYALTSVVQ GWNLGRVEPR VVQVDGQAET
VLKGLAVTGA KQQLATHTAV RFDGPEGELD QLQKCLAGGQ SHAIFNGAIS VPRDAQRTNA
AQLSRNLLLS GRARVDTKPE LEIVADDVRC AHGATVSQLQ DDELFYLQSR GIAAADATAL
LLRGACQEVI AQLPAAAQAW RPLERVMESL AP
|
|---|
| |