Gene Syncc9605_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2247 
Symbol 
ID3737978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2060302 
End bp2061621 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content39% 
IMG OID637776833 
Productdemethylmenaquinone methyltransferase-like 
Protein accessionYP_382539 
Protein GI78213760 
COG category[H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0684] Demethylmenaquinone methyltransferase
[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.201422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.259439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACGCAATATT TCTCCCCGCA AAAGGCAATA GCGAAAGAGT TGCTTCCAAG 
AATACAAGGT TGCTAGATGG AAAACCCCTG TTTCTTCATA CACTCGAAAA ATTATTGCAG
TTAGGAGATG ATTATGAAGT ATATTTAGAC AGTGAATGTC CTGAGATATT TAAGATGGCA
AGTCACTTAG AAGGATTCAA GCCTTTAATA CGTGATCCAG CTTTAGCCAC TAACGCAACC
GATGGAAATA AGCTTTTCCT CAATGAAGTC TTTAGCTGCA ATCACCAAGT CATTGCGCAA
CATCTTTGCA CATCTCCATT TATTGAAAAT AATACAATAA AAAATTGTTT CTCGAAAGTC
GGCCAAATGT CTCAAGATGG ATCTTGCTGG GATTCCAGTT TTTTAGTCAG AAAAGAAAAG
TTTTATATGT GGAAGAATGA CCTTCCTTTG TATAGCATTG ATTCCATCCC CAATAGTGCT
GATATTGAAA GCACTACTGT TGAAACCATG GGGCTTTATG TATGTTCCAG GGAAGCTGCT
TTAGACACTG AAAGAAGAAT TGGAAGGAAT CCTTGCTTGA TAGAAGCGAA ACCGCTTGAA
GCAGTTGATG TTAATTATGA AGAGGACCTA GAGATGGCGC AATTATTAGC AGCCGGGAAA
AGAGAGCAGG AAAGGAACTT GCTGAGAAAT TTGTCCTCTT TGCTGTCTAG TCCAATAATT
TCAGATATAC TCGATAGCCT AGGTCTTGAA TCACAAATCA TAAGAGGATT AAATCAAAAA
TGCCGAAACA ACGCAAAGAT TTTTGGCCCC GCAAAGACAA TGCATCTTCG CAGAAAATCA
AAAGAAGATA GATTCGACGA AGTTTATGAT GCATTAAAGC ATTATGAAAC TCTCGTGCCA
GGTGACGTTA TTTGCGTACA AAATGATTGC CAAGAGTTTG CTTACTTTGG TGAATTAAAC
GCCAATTTAG CCATCAGATC TGGCGCCATC GGTGCAGTTA TAGGGGGAAT GACGCGTGAT
CAAGAAGCAG TTTGTAGCCT AGGACTACCA GTTTTCGCCA AAGGGATCAC ATGCCAAGAT
GTAAAAAATA GGGCAGTATA TTCATCTATG AACAATCGAA TTTGTATTGA CGGAGTTTTC
ATTAGTCCGG GAGACATGAT GTTCGCCGAC AACGAAGGAA CTATTTGCAT ACCAAAAAAG
CACTTTAAAA CTGTCTTAGA GCTTGCAAAA GAAAGCATCA GGAAAGAAGG TGAAATAATA
TCGGATATTG CTACAGGAAT AAATGTCAGC GCTTTGAGAG CGGAGAGAGG AGATTTTTAG
 
Protein sequence
MKKYAIFLPA KGNSERVASK NTRLLDGKPL FLHTLEKLLQ LGDDYEVYLD SECPEIFKMA 
SHLEGFKPLI RDPALATNAT DGNKLFLNEV FSCNHQVIAQ HLCTSPFIEN NTIKNCFSKV
GQMSQDGSCW DSSFLVRKEK FYMWKNDLPL YSIDSIPNSA DIESTTVETM GLYVCSREAA
LDTERRIGRN PCLIEAKPLE AVDVNYEEDL EMAQLLAAGK REQERNLLRN LSSLLSSPII
SDILDSLGLE SQIIRGLNQK CRNNAKIFGP AKTMHLRRKS KEDRFDEVYD ALKHYETLVP
GDVICVQNDC QEFAYFGELN ANLAIRSGAI GAVIGGMTRD QEAVCSLGLP VFAKGITCQD
VKNRAVYSSM NNRICIDGVF ISPGDMMFAD NEGTICIPKK HFKTVLELAK ESIRKEGEII
SDIATGINVS ALRAERGDF