Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2230 |
Symbol | |
ID | 3735422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 2045128 |
End bp | 2045856 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637776818 |
Product | hypothetical protein |
Protein accession | YP_382524 |
Protein GI | 78213745 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.135698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00939678 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCTGCC CACAAATCCC AACCGACTGG CATCCATCGA CCTACGCCGT CGACGAGTTC AGCAAGGTGG TGTGGAAGCA AGGCAGCTAT GCCGTTGCCA TGGGTCTGAA GGGCAAAAAA GAAACCCTTA TTCCTGGCTG CGTCATTCAG CTCTGCACCC GTAAGGAATT GGTCGGCATC CGCAACCGCA TCAAAGTTGA GGAAGCTCGG CGTGATTCTG AATTCTTCAC CCCTGAAGAA GAGCAGGAGC TGGGCAGGAT GTTTGCCGAT GGGTGGATGA GACGGAGGCC CGAGAAGCAG GCACCAAAAC AGGGAACTTC TAAGGGGCAA CAAGAGAACA AGGGAATAAG CGTCTGGCTT ATCCCCGTTG TCTTTGGCTC GATTGGGATT GCACCCGGCC TTCTCTGGAC GGGCTTAGTT ACCGCTCGAA ACTTTGACGC CCACAGAGCC GCTAAGCGTC CAGCCATCGA CAGCAGCTCA CGGTTAGAAG CCAAAGCTGA GTGCGAGCAG TTCATCAAGA CTCTCCAGGG GGACTGGGAA TGCAAATACT TCGACAAAGT TCTTGAGTGG AACCTCGAAT ACAGAAAAAA CAAGCTTCTG ACATGGCTGT TCCGCCCGGA GAACGGCCCT CTCCTGAAAT TCGAAGAAAT CGGGATCTAC ACAGCTAGTG AGATCACATC TGATGACTCC ATTGGAGAAG ATGCCAAGAG CTGGCACTTT GAGAAGTAA
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Protein sequence | MTCPQIPTDW HPSTYAVDEF SKVVWKQGSY AVAMGLKGKK ETLIPGCVIQ LCTRKELVGI RNRIKVEEAR RDSEFFTPEE EQELGRMFAD GWMRRRPEKQ APKQGTSKGQ QENKGISVWL IPVVFGSIGI APGLLWTGLV TARNFDAHRA AKRPAIDSSS RLEAKAECEQ FIKTLQGDWE CKYFDKVLEW NLEYRKNKLL TWLFRPENGP LLKFEEIGIY TASEITSDDS IGEDAKSWHF EK
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