Gene Syncc9605_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2200 
Symbol 
ID3737095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2013541 
End bp2014347 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID637776788 
Producthemolysin A 
Protein accessionYP_382494 
Protein GI78213715 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCA AACAGCGTCT TGATCTGGAA CTCCTGACCC GTGGATTGGT CAGTTCACGC 
CAACAGGCGC AGCAATTGAT TCGTGCTGGA AAGGTGCGGG ATGGTTCCGG GAACCTGTTG
GATAAGCCCG GAACAGAGGT GACGCCGGAG CGAGAACTTG TGGTGGAGCA GCCCCCCCGC
TTTGTCTCTC GAGGGGGCGA AAAACTGCTA GAGGGCTTGA GGGCTTTCCC TGTGCCGGTG
AAGGAGCGTG TCTGCCTGGA CGGCGGCATC TCCACAGGGG GATTTACCGA TTGCCTGCTG
CAGCACGGCG CTTCTCGTGT TTATGGCGTT GATGTGGGTT ACGGCCAGAC GGCCTGGAGC
TTGCGGACTG ACGAACGGGT GGTGCTGCGG GAACGCACCA ACCTGCGCCA TCTGCAGCCC
GACGATCTCT ATGGAGCTGG CGATCCCTGG CCCAGTTTGG CCGTCACCGA TGTGTCGTTC
ATTTCTCTGC GGCTGATTCT TCCAGCCTTG CGCCGGCTGT TGCGGGGCCC AGAGACCGAT
GCTCTGGTGC TGGTGAAGCC GCAGTTTGAG GTGGGCAAGA GCCGGGTCGG AAAAGGGGGC
GTGGTGCGTG ACCCTGCGGC CCACAGGGAT GCCATTGAAT CGGTGATTGC AGCAGCAGCA
GAATCGGGTT GGCAGCCCCA GGGCTTGGTG GCTTCACCCA TCACCGGGCC TGCCGGCAAC
CACGAGTATG TGCTCTGGTT GGGGGAGGGA GATGCCGCTG TTTTTCCGGA TCTCGATGTT
TTGGTGGCGC AGACCCTCCA CGGTTGA
 
Protein sequence
MASKQRLDLE LLTRGLVSSR QQAQQLIRAG KVRDGSGNLL DKPGTEVTPE RELVVEQPPR 
FVSRGGEKLL EGLRAFPVPV KERVCLDGGI STGGFTDCLL QHGASRVYGV DVGYGQTAWS
LRTDERVVLR ERTNLRHLQP DDLYGAGDPW PSLAVTDVSF ISLRLILPAL RRLLRGPETD
ALVLVKPQFE VGKSRVGKGG VVRDPAAHRD AIESVIAAAA ESGWQPQGLV ASPITGPAGN
HEYVLWLGEG DAAVFPDLDV LVAQTLHG