Gene Syncc9605_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2047 
Symbol 
ID3737723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1868715 
End bp1869647 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID637776633 
Productsodium/bile acid cotransporter family protein 
Protein accessionYP_382342 
Protein GI78213563 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID[TIGR00841] bile acid transporter 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGG AGCGTTTCAC GCTGCTGTTT CCGCTTTGGA CGTTGCTGGG AGCTTTGCTG 
GCCTTGCTCC ATCCTCCGCT ATTCATCTGG TTCAAGGGGC TACTGATCTC CCTTGGACTC
GGCGTGATCA TGCTGGGCAT GGGCGTCGGG CTGACACCCG CTGATTTCGT GCGGGTGGGT
CGTCGCCCCC GCGCCGTGCT GCTGGGGGTG CTGCTGCAGT TCCTGGTGAT GCCGGCCCTT
GCCGCTGGGA TCGCGGCGGC TCTGCACCTG CCTGCCCCGC TTGCAGTGGG CTTAATCCTG
GTCGGCTGCT GCCCGGGGGG GACCGCCAGC AATGTGGTGG CTCTGATCGG CCGTGGCGAT
GTGGCGCTCT CGGTGGTCAT GACCACGATC AGCACCCTGA CGGCGGTGGT GTTGACCCCC
CATCTCACCC AGGTGTTGGC CAGCCAGTAC GTGCCGGTGG ACGGTTGGGC CCTGTTCCTG
GCCGTGCTTC AGGTGGTGTT GCTGCCCGTC ACCATTGGGG TGCTGCTCAA GCGTGGCCTG
CCCGGTGTGG CCCAGCGGAT TGAGCCGGTG ATGCCTCCCA TGGCGGTGAT GGCCATCGTG
ATGATCGTCT CCAGCATCGT GGGCAGTCAG AGGGGTGTGC TGCTTCAGCA GGGGGCCGTG
CTGATCCTGG CTTGCCTGCT GCTGCATGGC GGCGGCTTCC TGCTCGGCTG GCTGATTCCC
CGGCTGGTGG GGCAGAGCGT GCAGGCCCAG CGCACCATCA GCATCGAGGT GGGAATGCAG
AACTCAGGAC TGGCCGTGGT GCTCGCCCGC AGTGGCGGGT TCGCCAGTTC CCTCACGGCG
TTGCCGGGTG CCATCTCTGC GGTGATTCAC TGCCTGATCG GCAGCGCCCT TGCCGCCGTC
TGGAGGCGAC AACCTCGCGG TAATCGCAGG TGA
 
Protein sequence
MTWERFTLLF PLWTLLGALL ALLHPPLFIW FKGLLISLGL GVIMLGMGVG LTPADFVRVG 
RRPRAVLLGV LLQFLVMPAL AAGIAAALHL PAPLAVGLIL VGCCPGGTAS NVVALIGRGD
VALSVVMTTI STLTAVVLTP HLTQVLASQY VPVDGWALFL AVLQVVLLPV TIGVLLKRGL
PGVAQRIEPV MPPMAVMAIV MIVSSIVGSQ RGVLLQQGAV LILACLLLHG GGFLLGWLIP
RLVGQSVQAQ RTISIEVGMQ NSGLAVVLAR SGGFASSLTA LPGAISAVIH CLIGSALAAV
WRRQPRGNRR