| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2036 |
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| Symbol | |
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| ID | 3737712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1854383 |
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| End bp | 1857871 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637776622 |
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| Product | lipopolysaccharide biosynthesis protein-like |
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| Protein accession | YP_382331 |
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| Protein GI | 78213552 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA TGCCAAAAAA TCGTCATCCG CTCTCCGCTC TTTCGCACAC GACGAAGCAG
GTGCTGAAGC GCTCAGCCTC TGCGATGGGC CGGCAGAAAA TATTGCCCAA GGCACTGCGG
AAGCAGTTCA ATCGACTGGG CCAAGCCAAA CATTCAGCGC CACCAAACAA CAGACGCAAA
AAAACAACAC CCGAGCTGCA GGATTACATT AAGAACCTTC AAAGCAAAGA TATAAACAAG
AAAATTATTC GTGACTTTCG AGAATTAGCC CATTACGCCT ACGTGTTCGA CATTGAGCAG
TATAGGGCCC AATTAGAGAG GGAAGAGGCA GAGGGTCTTA AATGCATTGG AGACGTAATC
CTTCATTACT GCACATCAGG CAGCAAAAAA GGGATTGATC CCAGCATACT CTTTGATACA
GACAATTATT TAAGCAAATA CCCGGATGTC AGAGAAAGTG GACTCAACCC AATGGTTCAC
TGTTTCAAAT TCGGAATGAA CGAACACCGT TACTCTATGG ACAACATCCA TTTCATGCGG
AAGATGGCTG ACATAAAAAA AACCGTAACA GATGACTTTA ACGCAATCAA AGAAGGTCTA
ATCAATAAAA AAGTTGGAAT TTTTCTGCAT ATCTTCTATC CAGAACTTGG CGAAACAATT
GCAGCTTACC TCAAAAATAT ACCCTGCAGC ATCGATGTCT TTATTTCCAC AAGGGAAGAC
TCGGTCGCAG CCCTAGAGAA AATTTTTGCG CGAGTTGAAA ATACACAAAA GATCGAAGTC
AGACACTTCA GCAATATCGG ACGCGACGTC GCTCCATTCA TTGTTGGCTT TAGGGATCAA
ATTCTCAATT ACGACTACAT CCTCAAGCTG CATTCCAAAA AGAGTCCTCA CAGCAATGCA
CTTAGCGGCT GGTTCCTTCA CTGCCTGGAC AATCTGATTG GCAGCGAAGC CATCACAGCG
ACCAACCTTA AAGCCCTTCA ATCGCCAGAA GTAGGCATTG TGTATCCGAT TGAGAACTAT
GCTCTGAGCC TCGGAATCCA ACACGACTCC TGCTGGGGCC ACGAGGATGG CAACTACGCC
AAAGCCAGAC CCTTCCTCAA TCGCTACAAC CTTCGCCAGA TCAAACGAGA AAGCCAGTTC
CAGTTCCCAA CCGGGACGAT GTTTTGGTGC AAGCCAGCGG TCCTGCAATC AATCCTAGAC
TGGGGTCTTA ATTGGAACAA CTTTGACGAG GAAGGTGGAC AAATCGACGG GACGATTGCC
CACAGCATTG AACGCCTCAT TGGAATTTCA ACAACCGAAA TATACAAGCA AAAAATTCTG
ACAACCTATG CTGGATATCT ACTCTCCAAG CAACACATAC ATGACAAATC AATTATCGAA
GACCGCAATA AGCTGTGCAT TGATGGCTTC GAAAAAGTCA TTCAATTCAC CCCCCAGAGA
CTCGATACGA ACTGGTCACT GAAAAAAAAC ATCAACACCA AATCTCTTCA CATTCATTGG
GTCATCCCCA ATTTCACACC TGGCCTTGGC GGCCACATGA CCATTTTCAG AACAATCGAA
TATTTGGAAC GTTGTGGCCA CCAATGCACA ATCTGGGTCC ATTCCGAGCT CAAGGGGAAC
GACAAGCCAA GCCGCCTTAG CTCGTTGCAC AAACGTGTAA TCAACCAGTC CTTCATTTCC
CTGGATACAG ACCAGGTCTA CATGCTGGGC AACAACCAAG ACGACCTTGA TCTTGTATCC
GGCGACGTTG TCATTGCCAC AGACCGGATG AGCACTTATC CAGTGCTTGG AATGAAAAAA
TTTCAGAAAA GATTTTATTT TGTTCAAGAT TATGAGCCCT ATTTTTTCGC TCGAGGTAGC
TCCAGCATCC TTACCGAACA ATCCTATGCA TCTGATAACA ATTTTTTCTG CATTTGTGCC
AGCCCTTGGC TGAAACAGAA GATGGAAAGC TTTGGCAACT TAGCCATCTC TTTCCCACTG
GCCGTCGACC ACAGTGTTTA CTACCCCAAG AACGAAGAGA AACGCAAACG TGATGCCATT
GCCTTCTATG TAAGACGCAG TACGCCAAGG CGACTTTATG AACTGGGACT GCTTGCCTTA
AGAGCTTTAT TTGATCTTGG CGACCACTTC GAGATCATCA CCTTCGGCGA AAAAGACCTT
CCCGATCTTG GAATTCCAGT GAAAGTGAGG CATGCAGGAA TTCTGGACGC CGACGCCTTG
GCCAATCTCT ATCGCCAATG CGCAGTTGGT TTGGTGCTTT CGGGAACCAA CTACTCACTG
GTGCCAAACG AAATGATGGC CTGCGGGCTG CCGGTTGTTG ATATTGATGC CGAGCACACG
CGGATCTCCT ATCAACCAGA AACGGCGGTG TTGGCCAAAC CAACACCGAT AGAGCTGGCC
TCAGCATTAA GCCGATTGTT GAATGATGCA TCGTTCAGGC AAAGCACCGC TAAGGCTGGC
CTTGCCGCCA CTGAACAGCT TACCTGGGAT GGCTCCAACA AACTGATCGA AGCCTTCATT
CAGGAGTCAC TGTCATCGGC ACAATCGCTC CCGCGACAAC TTCAGTCATC GACTCCCTTG
GTGACGATTG TGATCCCCGT TTACAACGGA GGTACGATGC TCAAAACCGT CATTGAGTCT
TGTCTGTCGC AAGATCTTGA TCAGGAATTT GAAGTGTTAC TGATCGACAG TGCCTCCAGT
GATGGATGCC TCGATGCACT GCCACAAGAC GAACGACTCC ATCTACACAG AATTAAGCAA
GAGGATTTTG GTCATGGACG CACCCGCAAC TTGGGAGTAG AGCTAGCGCG AGGGGAATAC
GTCGCTTTCA TCACGCAGGA CGCGATTCCT GCAAATCGCA TGTGGCTGAT GAATCTCATC
GCTCCACTCC AAAAGGATCC AAATGTGGCC GGTGTTTTCG GCTGCCATAT CGCCCATTGC
GGGCATGGAC AACTCACCGC CCATGACCTT GACCGGCACT TCAATCGTTG GATTTTCAGA
AGTCATCGAC AACCAATCGA ACTGGATGTT GATCGACAGA ACTCCAATAG CGTTGTCTCC
AACCATGAAC GTTTCTACTC AGATAACAAT TCATGCCTGA GAAAATCTGT CTGGGAGACA
CTCCCACTTC CCGATGTTGT TTATGGTGAA GATCAATTAT GGGCACGTGA AATACTCAGA
AAAGGCTACA AAAAGGCCTA TGCATCAACA GCTGTTGTTC GCCATTCCCA CGAATACGAT
TTTCGGGAAA CAGTTATGCG CGCCAACACT GAATGGCACT TTTACAATCA GCTTCTTGGA
GAAAGTCTGC CTTCCACCAA AGATCAAGTT TTACAAATGG TTGAACAAGC TTGTACCAAC
GACCGAGAGG CTCAGAAACT GTACCCAGAC GTCAGCGACG ACGATTTAAT CCATCGGCGT
CGGATTCATT TTGCTCGTGC TTGTGGCTAC TACCTGGCCG CGAAAGGACA TGGGGAACTT
CGACCCTAA
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| Protein sequence | MSGMPKNRHP LSALSHTTKQ VLKRSASAMG RQKILPKALR KQFNRLGQAK HSAPPNNRRK
KTTPELQDYI KNLQSKDINK KIIRDFRELA HYAYVFDIEQ YRAQLEREEA EGLKCIGDVI
LHYCTSGSKK GIDPSILFDT DNYLSKYPDV RESGLNPMVH CFKFGMNEHR YSMDNIHFMR
KMADIKKTVT DDFNAIKEGL INKKVGIFLH IFYPELGETI AAYLKNIPCS IDVFISTRED
SVAALEKIFA RVENTQKIEV RHFSNIGRDV APFIVGFRDQ ILNYDYILKL HSKKSPHSNA
LSGWFLHCLD NLIGSEAITA TNLKALQSPE VGIVYPIENY ALSLGIQHDS CWGHEDGNYA
KARPFLNRYN LRQIKRESQF QFPTGTMFWC KPAVLQSILD WGLNWNNFDE EGGQIDGTIA
HSIERLIGIS TTEIYKQKIL TTYAGYLLSK QHIHDKSIIE DRNKLCIDGF EKVIQFTPQR
LDTNWSLKKN INTKSLHIHW VIPNFTPGLG GHMTIFRTIE YLERCGHQCT IWVHSELKGN
DKPSRLSSLH KRVINQSFIS LDTDQVYMLG NNQDDLDLVS GDVVIATDRM STYPVLGMKK
FQKRFYFVQD YEPYFFARGS SSILTEQSYA SDNNFFCICA SPWLKQKMES FGNLAISFPL
AVDHSVYYPK NEEKRKRDAI AFYVRRSTPR RLYELGLLAL RALFDLGDHF EIITFGEKDL
PDLGIPVKVR HAGILDADAL ANLYRQCAVG LVLSGTNYSL VPNEMMACGL PVVDIDAEHT
RISYQPETAV LAKPTPIELA SALSRLLNDA SFRQSTAKAG LAATEQLTWD GSNKLIEAFI
QESLSSAQSL PRQLQSSTPL VTIVIPVYNG GTMLKTVIES CLSQDLDQEF EVLLIDSASS
DGCLDALPQD ERLHLHRIKQ EDFGHGRTRN LGVELARGEY VAFITQDAIP ANRMWLMNLI
APLQKDPNVA GVFGCHIAHC GHGQLTAHDL DRHFNRWIFR SHRQPIELDV DRQNSNSVVS
NHERFYSDNN SCLRKSVWET LPLPDVVYGE DQLWAREILR KGYKKAYAST AVVRHSHEYD
FRETVMRANT EWHFYNQLLG ESLPSTKDQV LQMVEQACTN DREAQKLYPD VSDDDLIHRR
RIHFARACGY YLAAKGHGEL RP
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