| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2032 |
|---|
| Symbol | |
|---|
| ID | 3737708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1850765 |
|---|
| End bp | 1851703 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637776618 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_382327 |
|---|
| Protein GI | 78213548 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG CATCCAAACG ACGGGGAATC ATCCTTGCTG GCGGAAGCGG CACACGGCTG
CATCCGATCA CCCAGGCCGT CAGCAAACAG CTGCTGCCGG TTTACGACAA ACCGATGATT
TATTACCCGC TCAGCACCCT GATGCTGGCG GGGATCCGCG AGGTGCTGAT CATCACCACC
CCCCACGACA GAGAGGCATT TGAGCGCTTG CTCGGCGATG GCAGCCGCTG GGGCATGACG
ATTGAGTACG CCGTGCAGCC AAGCCCCGAT GGCTTGGCTC AGGCGTTTCT GATCGGTGCC
GACTTTCTGG CGGGCCACCC CGCCGCGCTG GTGCTGGGGG ACAACCTCTT CCATGGACAC
GATCTGGTGC CCCAGCTGGT GAACAGCAAC GATCAGCCCC TTGGAGCGAC TGTCTTTGCC
TATCCCGTCA GTGATCCCGA GCGTTATGGC GTAGCGGAAT TCGATAGCGA CGGTCGCGTG
CTGAGCCTGG AGGAAAAACC TCAACAGCCC AAAAGCCGCT ATGCCGTCAC CGGCTTGTAC
TTCTACGACG ACAGCGTCGT TGAGCGGGCC CGCGAGGTGA AGCCCTCAGC GCGTGGCGAA
CTGGAGATCA CCGATCTAAA TCAAGTGTAC CTCGATGAAG GACTGCTGCG GGTGGAACTG
ATGGGCCGTG GCATGGCCTG GCTAGACACC GGCACCTGCG ACTCGCTCAA CGATGCAGGC
AGCTACATCC GCACACTGGA ACATCGCCAG GGCCTGAAGG TGGGCTGTCC GGAGGAGGTG
GCCTGGCGCC AGGGCTGGAT CACGGCCGAA CAACTCGACC AACTGGCGCA ACCCCTCAAG
AAGAGTGGCT ATGGCTCTTA TCTCCTCCAG ATGCTTGAGG AGAACGTGAG CGATCACGCA
GCCCTGCAAA CCAGCCTGGA GGTGAGCCAT GCAGTTTGA
|
|---|
| Protein sequence | MSSASKRRGI ILAGGSGTRL HPITQAVSKQ LLPVYDKPMI YYPLSTLMLA GIREVLIITT
PHDREAFERL LGDGSRWGMT IEYAVQPSPD GLAQAFLIGA DFLAGHPAAL VLGDNLFHGH
DLVPQLVNSN DQPLGATVFA YPVSDPERYG VAEFDSDGRV LSLEEKPQQP KSRYAVTGLY
FYDDSVVERA REVKPSARGE LEITDLNQVY LDEGLLRVEL MGRGMAWLDT GTCDSLNDAG
SYIRTLEHRQ GLKVGCPEEV AWRQGWITAE QLDQLAQPLK KSGYGSYLLQ MLEENVSDHA
ALQTSLEVSH AV
|
|---|
| |