| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1993 |
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| Symbol | |
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| ID | 3737441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1810834 |
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| End bp | 1812222 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637776579 |
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| Product | photosystem II 44 kDa subunit reaction center protein |
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| Protein accession | YP_382289 |
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| Protein GI | 78213510 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.296438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.146878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAACGC TCTCTAATCC CGGTCTTGGC GCCACTGGCG GCAAAGACCT TCCCTCCACT
GGGTATGCCT GGTGGTCCGG CAACGCCCGC TTGATCAACC TGTCCGGCCG TCTGCTTGGT
GCCCACGTGG CCCACGCTGG TCTGATGGTG TTCTGGGCCG GCGCAATGAT GCTGTTCGAG
GTGAGCCACT TCACCTTCGA TAAGCCCATG TACGAACAGG GCTTCATCTG CATGCCTCAC
GTCGCCACCC TTGGCTACGG CGTGGGCCCC GGCGGTGAAG TCACTGATCT CTTCCCCTTC
TTCGTGGTCG GTGTTCTGCA CCTGATCAGC TCCGCCGTGC TCGGCCTCGG CGGCCTCTAT
CACGCCCTGC GTGGTCCTGA GATCCTGGAG AACTACTCCT CCTTCTTCTC CCAGGACTGG
CGTGACAAGA ACCAGATGAC CAACATCATT GGTTATCACC TGATTCTCCT GGGCGTCGGC
TGCCTGCTGC TGGTCTTCAA GGCCATGTTC TTCGGCGGCG TTTACGACAC CTGGGCCCCC
GGCGGCGGTG ACGTCCGCAT GATCACTAAC CCGACCCTCG ATCCGGGCGT GATCTTCGGC
TACCTGTTCC GCGCTCCCTT CGGCGGCGAG GGCTGGATTA TCGGTGTGAA CTCCATGGAG
GACATCATCG GTGGCCACAT CTGGCTGGGT CTGACCCTGA TTTTCGGTGG CATCTGGCAT
GCCATCACCA AGCCTTTCGG TTGGGTGCGT CGCGCCTTCA TCTGGAACGG TGAGGCCTAC
CTGAGCTACA GCCTTGGCGC TCTGAGCTTC ATGAGCTTCA TCGCTTCGGC CTACATCTGG
TTCAACAACA CCGCCTATCC CTCCGAGTTC TGGGGCCCCA CCAACGCTGA GGCATCCCAG
GCTCAGAGCT TCACCTTCCT GGTGCGTGAC CAGCGTCTCG GCGCCAACAT CGGTTCCGCC
ATGGGCCCCA CCGGCCTTGG TAAGTACTTG ATGCGATCAC CTACCGGTGA AATCATCTTC
GGGGGTGAAA CCATGCGCTT CTGGGACTTC CGTGGTCCCT GGCTTGAGCC CCTGCGTGGT
CCCAACGGCC TCAGCCTCGA CAAGCTGCAG AACGACATTC AGCCCTGGCA AGTGCGCCGT
GCGGCTGAGT ACATGACCCA CGCTCCGAAC GCCTCGATCA ACTCCGTGGG CGGCATTATC
ACCGAGCCCA ACTCGGTGAA CTACGTGAAC CTCCGCCAGT GGCTGGGTGC AACGCAGTTC
GTGCTTGCCT TCTTCTTCCT GGTTGGTCAC CTCTGGCACG CCGGCCGCGC CCGCGCTGCT
GCTGCTGGCT TCGAGAAAGG CATCGACCGC AAGGCTGAGC CTGTGCTCGG CATGCCTGAT
CTCGACTGA
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| Protein sequence | MVTLSNPGLG ATGGKDLPST GYAWWSGNAR LINLSGRLLG AHVAHAGLMV FWAGAMMLFE
VSHFTFDKPM YEQGFICMPH VATLGYGVGP GGEVTDLFPF FVVGVLHLIS SAVLGLGGLY
HALRGPEILE NYSSFFSQDW RDKNQMTNII GYHLILLGVG CLLLVFKAMF FGGVYDTWAP
GGGDVRMITN PTLDPGVIFG YLFRAPFGGE GWIIGVNSME DIIGGHIWLG LTLIFGGIWH
AITKPFGWVR RAFIWNGEAY LSYSLGALSF MSFIASAYIW FNNTAYPSEF WGPTNAEASQ
AQSFTFLVRD QRLGANIGSA MGPTGLGKYL MRSPTGEIIF GGETMRFWDF RGPWLEPLRG
PNGLSLDKLQ NDIQPWQVRR AAEYMTHAPN ASINSVGGII TEPNSVNYVN LRQWLGATQF
VLAFFFLVGH LWHAGRARAA AAGFEKGIDR KAEPVLGMPD LD
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