Gene Syncc9605_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1926 
Symbol 
ID3735368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1747853 
End bp1748743 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content64% 
IMG OID637776510 
Productfarnesyl-diphosphate synthase 
Protein accessionYP_382222 
Protein GI78213443 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG AGTTCGATTT CAAGGCCTAT CTCGGCAAGG CCAAAGAGCA GGTGGAAGCG 
GCCCTAGATG GATCCCTCGG TCCTGAGCGG CCGGAGTCCC TCAGGGAAGC GATGCGCTAC
TCGCTGCTTG CAGGTGGCAA GCGCCTGCGC CCGATTCTCT GCCTCGCCGC CTGTGAGCTG
GCCGGCGGGG AAGCGACACA GGCCCTGCCC ACGGCGGTGG CGCTGGAAAT GATCCACACC
ATGTCGTTGA TTCACGACGA CCTGCCGGCG ATGGATGACG ACGACCTGCG CCGTGGTCGT
CCCACCAACC ACAAGGTGTA CGGCGAAGCC GTGGCCATCC TTGCTGGGGA TGCCCTGTTG
ACCCGCGCCT TCGAAATGGT GGCGCTGCGC AGTCCGGGTG TGCCGGCTGA GCGGTTGCTC
AAGGTGGTGG GAGAACTCTC GTTGGTGGCT GGCGCCCCGG GCCTGGTGGG CGGCCAGGTG
GTGGATCTGG AAAGCGAGGG CAAGGAGGTG GATCTTGAAA CCCTCGAGTA CATCCACCTC
CACAAAACCG GAGCCCTGTT GAGCGCTTGT GTAATCACCG GGGCGATGAT CGGCGGGGCT
GATGAGGCGC TGATCAAGGC TCTGCGCACC TATGCCAGGG GGATCGGCCT CGCCTTCCAG
ATCATCGACG ACATCCTCGA CATCACTGCC AGCAGCGAGG TTCTGGGCAA AACCGCCGGC
AAGGACCTCA TCGCCGACAA GACCACCTAT CCCAAGCTTC TGGGGCTTGA TGAGTCCCGC
CGCCGGGCCG ATGCGTTGGT GAACGAAGCG AAAGAATCGC TTCAACCCTG GGCCGAGAAG
GCCGTGCCCC TGCTGGCGTT GGCCGACTTC ATCACCAGCC GCGACCGATG A
 
Protein sequence
MSAEFDFKAY LGKAKEQVEA ALDGSLGPER PESLREAMRY SLLAGGKRLR PILCLAACEL 
AGGEATQALP TAVALEMIHT MSLIHDDLPA MDDDDLRRGR PTNHKVYGEA VAILAGDALL
TRAFEMVALR SPGVPAERLL KVVGELSLVA GAPGLVGGQV VDLESEGKEV DLETLEYIHL
HKTGALLSAC VITGAMIGGA DEALIKALRT YARGIGLAFQ IIDDILDITA SSEVLGKTAG
KDLIADKTTY PKLLGLDESR RRADALVNEA KESLQPWAEK AVPLLALADF ITSRDR