Gene Syncc9605_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1841 
Symbol 
ID3736852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1679363 
End bp1680319 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content54% 
IMG OID637776428 
Producthypothetical protein 
Protein accessionYP_382141 
Protein GI78213362 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0091091 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAC TGGCAGAAAT GAACTGGCGA TCCACCTCAA GCATGAGCCA GTCCAGCGAC 
CACGACATGA CAGCCGTTCT CGAGGCCATC GATCACTACA GCGATGGCGA TGTTGACCGT
CCGCAGGAAA TCATGGTGGA ACTGCAGGAG GGATTTTCCA ACAAGCACAA ACGGCTGAAC
AAAAAGGTCT ACGAAAAAGA GCTGGCCAAA CTCCAGACGG AACTGGTCAA AATGCAGTAC
TGGGTGAAAG CCACCGGCTT TCGCATGATC ATCCTGTTTG AAGGGCGAGA CGCCGCAGGC
AAGGGAGGGT CGATCAAACG GCTGACTGAG CCCTTGAACC CAAGGGGATG TCGAGTGGTG
GCCCTGGGCA CGCCTTCCGA GCATCAGAAA AGCCAGTGGT ACTTCCAGCG CTATGTGGAG
CATTTTCCAA GTGCTGGAGA AATCGTTGTT TTTGACCGGA GCTGGTACAA CCGCGCCGGT
GTGGAAAAGG TGATGGGCTT CGCGACACGC GAACAGGTGG AGCAGTTTTA TGTCTCGTGC
CCACAATTTG AGCAAATGCT GGTGCAGGAC GGAATCCTGC TGCTCAAATA CTGGTTCTCC
ATTAACGATG ATGAACAGGA GAAGCGTTTC CAGGAACGCA TTGATAACGA AGAGCGTCGC
TGGAAGATGA GTCCGATGGA CATCGAGTCA CGCAACCGCT GGGTGGAGTA TTCGAAAGCA
AAGGACACCA TGTTTGCCAA GACGCACATC CCGGAAGCCC CATGGTTCAC CGTGGAGGCC
AATGACAAGC GCCGCGCGCG CCTGAATTGC CTGCGTCACA TTCTCAGCAA GGTGCCCTAC
GAAGACATGA CACCTCCACC CATCAAGATG CCCAAGCGCC CAAAGCAAGG AAGCTACAAA
CGGCCTCCTT TTAACGAGCA ATTCTTTGTT CCAAACAACT ATCCCTACAA GGACTAA
 
Protein sequence
MTSLAEMNWR STSSMSQSSD HDMTAVLEAI DHYSDGDVDR PQEIMVELQE GFSNKHKRLN 
KKVYEKELAK LQTELVKMQY WVKATGFRMI ILFEGRDAAG KGGSIKRLTE PLNPRGCRVV
ALGTPSEHQK SQWYFQRYVE HFPSAGEIVV FDRSWYNRAG VEKVMGFATR EQVEQFYVSC
PQFEQMLVQD GILLLKYWFS INDDEQEKRF QERIDNEERR WKMSPMDIES RNRWVEYSKA
KDTMFAKTHI PEAPWFTVEA NDKRRARLNC LRHILSKVPY EDMTPPPIKM PKRPKQGSYK
RPPFNEQFFV PNNYPYKD