Gene Syncc9605_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1823 
Symbol 
ID3736945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1662548 
End bp1664293 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content62% 
IMG OID637776410 
ProductATPase 
Protein accessionYP_382123 
Protein GI78213344 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCC CATCCCAGGC CGGATTCCGC CGGCTGCTGC CGTTGCTTCG CCCCCACCTG 
CGGGAACTGC TCTGGGGAGG CTGCTGCATG GTGATTTACG TCGGCAGCTT CCCGCTGCTC
GTCCAGCTGG CTGGAGATTT GTTTCCTGCG TTGGGATCGG GTGATCTCGT CCGTGTGCTT
CAGCTGATCG GACTGGCATT GCTGATTTTT GCTGTTCAGA AAATCGCCCA GTTCGGTCAG
GACTCTCTCC TTGCCGGGCC TGCACTGCTG GTGAGCCAGG ACTTACGGCG CGATCTGTTT
CGCCGCCTGC AGACCGTGGA GCTCGGGGCG TTGGAGAAGC TCTCGGCCGG CGACCTCACC
TACCGCTTCA CCGAAGACGC GGATCGCGTT AGCGAGGTGC TGTATAAGAC CATCCACGAC
ACGGTCCCCA GCGTGCTTCA GCTGGTTGCT GTGCTGGGGA TGATGCTATG GCTCGACTGG
AAACTGACGC TGGCCATCCT GTTGCTGGCG CCGGTGATCG TCTGGCTGAT CAGCCTGTTC
GGTGCTCGCG TGATGGCGGC CACGGAACGC AGTCAGAAAA AGGTGAGCGA ACTGGCCGGT
CTGCTGGGTG AGGCCATCGA AGGTTTGCCC CTGGTGCGTG CTTTTGCCGC CGAGCCCTGG
CTGCAGGACC GTTTCGAGAC AGAAATCGAC CAACACAGGC AGGCACGCCA CCGCACCTAC
AGCCTTGTGG CGCTCCAGCA TCCGGTGGTT GGCATCATCG AGGTGGTTGG TCTGTTTGCC
GTGCTGGCCC TCGGAGCCTG GCGGATCCAG ACCGGTGATC TGAGCATTGC AGGGTTGAGC
AGTTACCTGA CGGGGCTGAT CGTGCTGATC GATCCCATTG CCCACGTCAC CAACAACTTC
AACGAATTCC AGCAGGGTCA GGCGTCGCTG CGACGTCTGC GGGAGATCGA GCGAGAGCCT
CAGGAGGCTG CGGATCCAGC CGAGGCGCAA TCCATCGGTG CTCTCCGGGG CGATCTGGTC
TTTGACCAGG TGAGCTTTGG CTATGACCCA GCCCAGCCGG TGCTGCATCA ACTCAATCTG
CGGGTGGATG CGGGCCAGGT GTTGGCCATT GTTGGCCCCT CTGGTGCGGG CAAAAGCACC
TTGCTGTCGC TCCTGCTGCG GTTCAACACG GTGCAACAGG GCGAGATCCG TCTCGACGGC
ACGGACATCA GCTTGATGCG CGCCCGAGAG CTGCGTCAGC AGGTGGCCCT GGTTCCGCAG
CGCACCACCG TGTTCTCCGG AACCATTGCC GAAGCGATTC GTTTCGGGCG CCGTGCGACC
GATGACGAGG TTCGCGATGC GGCTCGCTTG GCCAATGCGG ATGATTTCAT CCGTGCCTTG
CCCCAGGGGT ATGACACTCA GCTCGAGGAA CGGGGAACCA ATGTTTCCGG TGGACAACTG
CAGCGGATCG CCATTGCCCG GGCAGTGCTT GGTAATCCAG CGCTGCTGCT GCTGGATGAA
GCCACCAGTG CCCTCGATGC TGAAGCGGAG GCTGCGGTGC AACTCGGTCT GAAGCAGGCG
ATGAAGGGAC GAACGGTGTT GGTGATCGCC CACCGTCTGG CCACGGTTCA GGAGGCCGAT
CGCATTGTGG TTCTTGAAAA AGGAGCGGTT GTCGATCGAG GCACCCACGA CGACTTGATG
CAGCGTGGTG GGCGTTACCG CGAACTGTGC GAACGACAGT TCATTCGAGA TCGGCAAAAG
TCCTGA
 
Protein sequence
MLTPSQAGFR RLLPLLRPHL RELLWGGCCM VIYVGSFPLL VQLAGDLFPA LGSGDLVRVL 
QLIGLALLIF AVQKIAQFGQ DSLLAGPALL VSQDLRRDLF RRLQTVELGA LEKLSAGDLT
YRFTEDADRV SEVLYKTIHD TVPSVLQLVA VLGMMLWLDW KLTLAILLLA PVIVWLISLF
GARVMAATER SQKKVSELAG LLGEAIEGLP LVRAFAAEPW LQDRFETEID QHRQARHRTY
SLVALQHPVV GIIEVVGLFA VLALGAWRIQ TGDLSIAGLS SYLTGLIVLI DPIAHVTNNF
NEFQQGQASL RRLREIEREP QEAADPAEAQ SIGALRGDLV FDQVSFGYDP AQPVLHQLNL
RVDAGQVLAI VGPSGAGKST LLSLLLRFNT VQQGEIRLDG TDISLMRARE LRQQVALVPQ
RTTVFSGTIA EAIRFGRRAT DDEVRDAARL ANADDFIRAL PQGYDTQLEE RGTNVSGGQL
QRIAIARAVL GNPALLLLDE ATSALDAEAE AAVQLGLKQA MKGRTVLVIA HRLATVQEAD
RIVVLEKGAV VDRGTHDDLM QRGGRYRELC ERQFIRDRQK S