| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1681 |
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| Symbol | |
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| ID | 3737049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1542090 |
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| End bp | 1543646 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637776269 |
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| Product | carotenoid isomerase |
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| Protein accession | YP_381985 |
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| Protein GI | 78213206 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.157771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA ACCAGCAGTG GGATGCCGTT GTGATCGGTT CCGGCATCGG TGGTTTGGTC
ACCGCCAGTC AGTTGGCCGC CAAGGGAGCC AAGACCCTCG TCTTGGAGCG GTATCTGATC
CCGGGTGGCA GTGGCGGTGC CTTCAGACGC GAGGGCTACA CCTTTGATGT GGGGGCCTCG
ATGATCTTCG GCTTCGGCAA GAAGGGTTTC ACCAACCTGC TCACCCGGGC CCTTGCTGAT
GTGGGGGAGC ACTGCGATAC CATCCCTGAC TCTGCCCAGC TCGAGTACCA CATGCCCGGT
GGGCTGCGCA TCGCCGTGGA TCGCGACTAC GAGCAGTTCA TCGCCGATCT CACGGCGCGG
TTTCCCCATG AGGCTGAGGG GATCCGCCGC TTCTACGACA CCTGCTGGCA GGTGTTCAAT
TGCCTCGATG CCATGCCGCT TCTCTCGTTG GAGGATCCGG CTTATCTCAC CAAGGTGTTC
TTCAAGGCAC CACTGGCCTG TCTTGGGCTG GCCCGCTGGC TGCCTTTCAA CGTCGGTGCG
GTGGCCCGCC AGCACATCAA AGATGAGCAG CTGCTCAAGT TCATCGATAT CGAGTGTTTC
TGCTGGTCGG TGATGCCGGC GGATCGCACG CCGATGATCA ACGCCGGCAT GGTGTTTTCC
GATCGGCATG CGGGGGGGAT CAACTACCCC AAAGGAGGCG TCGGCGTGAT CGCCGAAAAG
CTGGTGAAGG GATTGGAACG CCACGGCGGA GCCATCCGCT ACAAGGCCCG AGTCACCGAG
GTGTTGATCG AGAACGATCA GGCGGTTGGC GTGAAGCTGG CCGATGGCGA GGTCATCCGC
GCCAAGCGTG TGATTTCCAA TGCAACCCGC TGGGACACCT TCTCCGGAGC GGGTGATGAG
CAGCACCGCT CTGGCCAATC CCTGGTGGAT GCCGCCCACA CGCCGGGCAA GGAGCAGTTC
TGGCGCAAGC GTTATATGCC TTCGCCCTCG TTCCTGTCGC TGCATCTGGG GGTTCGGGCT
GACCTGATTC CGGCGGGCAC CCACTGCCAT CACCTCCTGC TCGAAGACTG GAACTGGATG
GAGGACGAAC AGGGGGTGAT CTTCGTGTCG ATGCCCTCGC TGCTGGATCC GGATCTGGCC
CCGGCGGGGC ATCACATCGT TCACACCTTC ACGCCGTCAT CGATGGAGGC ATGGCAAGGA
CTGACCCCCA GCCAGTACCG CGAGAAAAAG GAGGCCGATG CGGCACGGTT GATCCAGCGG
CTGGAGGCGA TCCTTCCCGG CCTCGCCGAT GCCATCACTC ACAAGGAAAT CGGCACGCCC
CGCAGCCACC GGCGTTTTCT GGGTCGCTTT CAAGGCAGCT ACGGCCCGAT TCCGGCCATG
CAACTGCCGG GATTGCTGCC GATGCCGTTC AACCGCACGG GCCTGAAAAA CCTCTACTGC
GTTGGTGATT CCTGTTTCCC CGGCCAGGGC CTCAATGCTG TGGCCTTCAG TGGGTTTGCC
TGTGCCCATC GTGTTGGGGC CGACCTTGGC CTGAACCACT GGGCACTGCC GGCCTGA
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| Protein sequence | MSENQQWDAV VIGSGIGGLV TASQLAAKGA KTLVLERYLI PGGSGGAFRR EGYTFDVGAS
MIFGFGKKGF TNLLTRALAD VGEHCDTIPD SAQLEYHMPG GLRIAVDRDY EQFIADLTAR
FPHEAEGIRR FYDTCWQVFN CLDAMPLLSL EDPAYLTKVF FKAPLACLGL ARWLPFNVGA
VARQHIKDEQ LLKFIDIECF CWSVMPADRT PMINAGMVFS DRHAGGINYP KGGVGVIAEK
LVKGLERHGG AIRYKARVTE VLIENDQAVG VKLADGEVIR AKRVISNATR WDTFSGAGDE
QHRSGQSLVD AAHTPGKEQF WRKRYMPSPS FLSLHLGVRA DLIPAGTHCH HLLLEDWNWM
EDEQGVIFVS MPSLLDPDLA PAGHHIVHTF TPSSMEAWQG LTPSQYREKK EADAARLIQR
LEAILPGLAD AITHKEIGTP RSHRRFLGRF QGSYGPIPAM QLPGLLPMPF NRTGLKNLYC
VGDSCFPGQG LNAVAFSGFA CAHRVGADLG LNHWALPA
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