Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1648 |
Symbol | |
ID | 3736811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1515608 |
End bp | 1517431 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637776236 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_381952 |
Protein GI | 78213173 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGA TTTCAGAGAT CAATCAGGCG AAGCCACCTT TTATGACCGA ACAGCAACAG CAGCGCGACG ATTCCGCCTG CGCAGTGGAT CTTTCTGCAT CCGAACTGCC GGAAGCCAAC TCCAATGCTG AGGTGTTCAC CACCACCATC ACATCGGCTG AACCGGAATC CGGTTTTGCC GGTTTTGGTT TCAGCGAGGC CCTGCTCCGC ACCCTGGCGG ACAAGGGATA CAGCGAACCT TCCCCCATTC AGAAGGCGGC CTTCCCCGAG CTGATGCTTG GCCGCGATTT GGTGGGTCAG GCCCAGACCG GCACCGGTAA AACAGCAGCG TTTGCGTTGC CGTTGCTCGA GCGTCTGGAA AGCGGCCAGA AAACACCCCA GGCTCTCGTT CTCGCCCCCA CACGGGAGCT GGCGATGCAG GTGGCCGAAT CGTTCAAGGC CTATTCCGCC GGCCATCCCC ATCTGAAGGT GCTGGCGGTG TACGGCGGCA CGGATTTCCG CTCTCAGATC AGTGCTCTCA GGCGCGGTGT GGATGTGGTG GTAGGCACCC CTGGCCGGGT GATGGACCAC ATGCGTCAGG GCACGCTCGA CACCAGTGGT CTGCGCAGCC TGGTGCTCGA TGAAGCAGAC GAAATGCTCC GCATGGGCTT CATCGACGAT GTGGAGTGGA TCCTCGATCA GCTTCCTGAG CAGCGTCAGG TGGTTCTGTT CTCCGCGACG ATGCCTCCTG AGATCCGTCG TCTGTCCAAG CGTTATCTCA AGGATCCTGC TGAGGTCACG ATCCGCACCA AGGATCAGGA AGGCAAGCGG ATACGCCAGC GCTCGATCAC GGTGCCGATG CCGCACAAGC TCGAAGCCCT GCAACGGGTT CTCGACGCCT GTGGTAGTGA GGGTGTGATC ATCTTCGCCC GCACCAAGGC GATCACCCTG ACCGTGGCTG AAACCCTTGA AGCCGGCGGC CATCAGGTGG CGGTGCTCAA TGGCGATGTT CCCCAGAACC AGCGGGAACG CACCGTGGAG CGGTTGCGCA GTGGATCGGT CGACATCCTT GTGGCCACCG ACGTTGCGGC GAGGGGTCTT GATGTGGAGC GCATCGGCCT GGTGATCAAC TACGACATGC CGTTCGACAG CGAGGCCTAC GTGCACCGCA TCGGCCGGAC GGGCCGGGCT GGACGCACCG GCGAAGCGGT TCTGTTCGTG ACCCCACGGG AAAGGCGCTT CATCCGCAAC CTCGAGCGGG CCACGGGGCA GCCGATCGAA GCGATGGAGG TGCCCGGCAA CACGGCCATC AACCAGGGAC GGCTCGACCG CCTGCGCAAG CGTTTGAGTG ATGCAGCCCA ATCCCAACGT CCTGATGCCG ATGAAGCGGC CTTGCTTCAG GAGTTGATGC AGCGGGTGGC CACGGAACTC GAGCTAAGCC CCGAGCAGCT GGCCATGGCA GCACTGAACC TGGCCATCGG ACCCGATGCG CTGCTGCGCA AGGGTGACGA CGACTGGATT CAGAACACCC GTCGCAACGA CCGCGACCGT GATCGCCATT CAGGAGATCG CCGTGAGCGG CGCGAGCGTC CGGCACGGGC ACCTGAGGAG AACATGCAGC GTTACCGCGT TGAGGTGGGT CACCGCGATC GGGTCAAACC CGGCAACCTC GTGGGCGCCA TCGCCGGTGA GACCGGACTG CAGGGCCGGA TGATCGGTCG GATCCAGATT TTCGACAATC ACAGCCTGGT GGATCTCCCC AAGGGCATGC CAGAGGATGT GTTCAACAGC CTTCAACGCC TGCGCGTGAT GAACCGCGAA CTGCAAATCA GCAAGGCCTC TTGA
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Protein sequence | MSLISEINQA KPPFMTEQQQ QRDDSACAVD LSASELPEAN SNAEVFTTTI TSAEPESGFA GFGFSEALLR TLADKGYSEP SPIQKAAFPE LMLGRDLVGQ AQTGTGKTAA FALPLLERLE SGQKTPQALV LAPTRELAMQ VAESFKAYSA GHPHLKVLAV YGGTDFRSQI SALRRGVDVV VGTPGRVMDH MRQGTLDTSG LRSLVLDEAD EMLRMGFIDD VEWILDQLPE QRQVVLFSAT MPPEIRRLSK RYLKDPAEVT IRTKDQEGKR IRQRSITVPM PHKLEALQRV LDACGSEGVI IFARTKAITL TVAETLEAGG HQVAVLNGDV PQNQRERTVE RLRSGSVDIL VATDVAARGL DVERIGLVIN YDMPFDSEAY VHRIGRTGRA GRTGEAVLFV TPRERRFIRN LERATGQPIE AMEVPGNTAI NQGRLDRLRK RLSDAAQSQR PDADEAALLQ ELMQRVATEL ELSPEQLAMA ALNLAIGPDA LLRKGDDDWI QNTRRNDRDR DRHSGDRRER RERPARAPEE NMQRYRVEVG HRDRVKPGNL VGAIAGETGL QGRMIGRIQI FDNHSLVDLP KGMPEDVFNS LQRLRVMNRE LQISKAS
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