| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1630 |
|---|
| Symbol | |
|---|
| ID | 3735550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1500701 |
|---|
| End bp | 1501531 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637776218 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_381934 |
|---|
| Protein GI | 78213155 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1624] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00159] conserved hypothetical protein TIGR00159 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0696242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGTGT TGGCGGTGGT GGATCCGCGC CTAGTGCTCG ACGTTCTCTT TGCCTCTTCC
ATCGGCTTTC TGCTTTTTTC CCGCGTCAAC GAGCAGCGCA CCCTTTGGCT GCTTCGTGGC
TGGTTGTTTC TGGTGGCGAT GGCCTGGTTC GTCCAGCGCT TCGCCAACCT GCCCCTCACC
ACCAAGCTGG TGGACGCGCT GGTTATGGCC TGTTCGCTAT CCCTGGCCAT CCTTTGGCAA
GGGGAGCTGC GTCGCTTGAT GGAGTTGCTG GGCACCGGTC GTCTGGCCGT GTTGCTGGGC
AATCCCCAGA AAGAGTTCAG CGCTTCGGCG GGCACCGTCA ACCAGATCAC CGAGGCCGCA
GGCCGGCTGT CACAGCTGCG ACGTGGGGCC TTGATCGTGG TGGACCTGGG AAGCGACCTC
AGGCCTGAGG ACTTTCTCAA TCCCGGCATT CCCATTGGTG CCGTGCTGAG TCGCGAGCTG
ATGCTCAACC TGTTCGCCGC CGACACCCCC CTCCACGACG GTGCAGTGCT GGTGCGGGGC
AATCGAATCG AGTCGGCGGG GGTGATTCTT CCTCTGTCGA GGCACAGCGT GAGCCGTTTT
GGCACCCGTC ATCTGGCGGC CCTCGGCATC ACTGAACGCT TCGATCGCTG CATCTGCATC
GTGGTGTCGG AAGAAACCGG AACGTTGTCG CTGGCGAACC AGGGCAAGCT GGAACGACCG
ATCACCAGTT CCCGCCTCCA GGAACTGCTC AAGGAGCTGT TCAGTACGGC CGAATCGATG
CCGCCGGCAC GGCGTACGGT GGGTAGCGCT CCGTCCGAAT CGCTGTCTTG A
|
|---|
| Protein sequence | MNVLAVVDPR LVLDVLFASS IGFLLFSRVN EQRTLWLLRG WLFLVAMAWF VQRFANLPLT
TKLVDALVMA CSLSLAILWQ GELRRLMELL GTGRLAVLLG NPQKEFSASA GTVNQITEAA
GRLSQLRRGA LIVVDLGSDL RPEDFLNPGI PIGAVLSREL MLNLFAADTP LHDGAVLVRG
NRIESAGVIL PLSRHSVSRF GTRHLAALGI TERFDRCICI VVSEETGTLS LANQGKLERP
ITSSRLQELL KELFSTAESM PPARRTVGSA PSESLS
|
|---|
| |