Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1616 |
Symbol | |
ID | 3735995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1485785 |
End bp | 1486537 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637776204 |
Product | ribosomal large subunit pseudouridine synthase B |
Protein accession | YP_381920 |
Protein GI | 78213141 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.771877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0569453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGGC AGCGCCTGCA GAAACTGATC GCTGCTGCCG GCCTCTGCTC CAGGCGCCGG GCTGAGGAAT GGTTGCAGGC CGGCCGCGTG ACGGTGGATG GTCAGGTCGC CCGCGTTGGC GACCAGGCCG ATCCGCAGCA GCAGACGATT CATGTGGATG GTCAGCCGTT GCCGTCCCCC GGAATGGCAC GGGTGCTGCT GATGAACAAG CCGGTGGGCG TGATCTGTAG CTGCGATGAC CCGCAGGGTC GCCGCACGGT GCTTGACCTG CTGCCTCCGG AGCATCGGGC GGGACTTCAC CCCGTTGGCC GCTTGGATGC CGATAGCCAT GGCGCGCTTC TGCTCACCGA TCTGGGCGAA CTCACCTTGA AACTCACCCA CCCGCGTTAC AGCCACGCCA AGACCTACCG GGTTTGGGTG CAGGGTGTGC CATCAGAGCC GGTTCTGGAT CGCTGGCGTC GGGGTGTGCC CCTGGATGGG CGCTTGACCC GCCCCGCTCG GGTGCGCCAG TTGCGGACTT GGGGTGACCG CTCGCTTCTG GAGATTGAGC TGCGGGAAGG GCGCAACCGA CAGATCCGTC GGATGGCGGA AGCTCTTGGC TATCCGGTTG TGGACCTGCA GCGCACGGCG ATTGCTGGGT TGCCGCTCGG TGATCTGGCC GAGGGGTGCT GGATCTGGTT GTGCGAGGGA GAATGGAAGC CCCTGCTCGA GCGGGCTGGT TCGATGGATC TGCCCAACAG CCCATGCGAC TGA
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Protein sequence | MTRQRLQKLI AAAGLCSRRR AEEWLQAGRV TVDGQVARVG DQADPQQQTI HVDGQPLPSP GMARVLLMNK PVGVICSCDD PQGRRTVLDL LPPEHRAGLH PVGRLDADSH GALLLTDLGE LTLKLTHPRY SHAKTYRVWV QGVPSEPVLD RWRRGVPLDG RLTRPARVRQ LRTWGDRSLL EIELREGRNR QIRRMAEALG YPVVDLQRTA IAGLPLGDLA EGCWIWLCEG EWKPLLERAG SMDLPNSPCD
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