Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1488 |
Symbol | |
ID | 3736424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1386895 |
End bp | 1387908 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637776077 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_381793 |
Protein GI | 78213014 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.520647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.191838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCAGCGTT TCCCTGCAGC TGCCGCAGTT GTTTTAGGAC CAACAGGTGC GATCCTTGAT AGGCCAGATT TGTCTTCATT GCACCTGTTG AGCTGGAAAC GTTCGGCGGC CGTGCTGCTG GTTGTGATGG GTGTGTTGCT CGCCTCCTGC CGCAGTCGAG ACAAGAACAT CGCCGCGGAT TCCCGCCCCC AGGTGCTCAC CACCTTCACG GTGTTGGCTG ATCTGGCCAG AAATGTGGCG GGTGATCGGA TGCAGGTGGC TTCGATCGTC AAGCCCGGGG CCGAGATCCA CGGTTATCAA CCCACCCCCA GTGACATCGA GCGCGCCAGC AAGGCGGATC TGATTGTCGA GAACGGGTTG GGGCTGGAGT TGTGGGCCCA GCGTTTCACG GCTGCAGCGG GGGACGTGCC CACCATCACA CTTTCGGAGG GGATGGAGCC TCTGCTGATC AAGGAGGACG CCTATTCCGG TAAGCCCAAT CCCCATGCCT GGATGTCCCC CCAGCGCACG ATGGGCTATG TGGACCATCT GGAGCGGGCC TTCAGCCAAC TCGATCCGGC CGGAGCCGAG GTCTTTGCCG CTAACTCGTC AGTCTACAAA GCCAAGCTCA AGGCTCTGGA TCAGGAGCTG CGCACGGCGA TTGCCACGCT GCCGGCCCGG CAACGGCTGC TGGTGAGTTG TGAGGGGGCC TTCACTTATC TGGCAGCGGA TTACGGACTC GAAGAGGCCT ATCTCTGGCC GGTGAATGCC GAAAGCGAGA TCACACCCAA ACGCATGGCA CGGTTGATCG ACACGGTGCG GGAGCGGCAG GTGCCGGCCA TTTTCTGTGA AAGCACCGTG AGCGATAAAG CCCAACGGGA GGTGGCAGCG GCGGCCGGAG CACGATTCGG TGGCACCTTT TACGTGGATT CCCTCTCATC TCCGGACGGC CCTGCACCAA CCCTGTTGGA ACTGCAGCGG CACAATGTGG GTCTGATCCT CAAGGGCCTG GACCTGTCCG AGAGCAACCG CTGA
|
Protein sequence | MQRFPAAAAV VLGPTGAILD RPDLSSLHLL SWKRSAAVLL VVMGVLLASC RSRDKNIAAD SRPQVLTTFT VLADLARNVA GDRMQVASIV KPGAEIHGYQ PTPSDIERAS KADLIVENGL GLELWAQRFT AAAGDVPTIT LSEGMEPLLI KEDAYSGKPN PHAWMSPQRT MGYVDHLERA FSQLDPAGAE VFAANSSVYK AKLKALDQEL RTAIATLPAR QRLLVSCEGA FTYLAADYGL EEAYLWPVNA ESEITPKRMA RLIDTVRERQ VPAIFCESTV SDKAQREVAA AAGARFGGTF YVDSLSSPDG PAPTLLELQR HNVGLILKGL DLSESNR
|
| |