Gene Syncc9605_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1488 
Symbol 
ID3736424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1386895 
End bp1387908 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID637776077 
ProductABC transporter substrate-binding protein 
Protein accessionYP_381793 
Protein GI78213014 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.520647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.191838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCGTT TCCCTGCAGC TGCCGCAGTT GTTTTAGGAC CAACAGGTGC GATCCTTGAT 
AGGCCAGATT TGTCTTCATT GCACCTGTTG AGCTGGAAAC GTTCGGCGGC CGTGCTGCTG
GTTGTGATGG GTGTGTTGCT CGCCTCCTGC CGCAGTCGAG ACAAGAACAT CGCCGCGGAT
TCCCGCCCCC AGGTGCTCAC CACCTTCACG GTGTTGGCTG ATCTGGCCAG AAATGTGGCG
GGTGATCGGA TGCAGGTGGC TTCGATCGTC AAGCCCGGGG CCGAGATCCA CGGTTATCAA
CCCACCCCCA GTGACATCGA GCGCGCCAGC AAGGCGGATC TGATTGTCGA GAACGGGTTG
GGGCTGGAGT TGTGGGCCCA GCGTTTCACG GCTGCAGCGG GGGACGTGCC CACCATCACA
CTTTCGGAGG GGATGGAGCC TCTGCTGATC AAGGAGGACG CCTATTCCGG TAAGCCCAAT
CCCCATGCCT GGATGTCCCC CCAGCGCACG ATGGGCTATG TGGACCATCT GGAGCGGGCC
TTCAGCCAAC TCGATCCGGC CGGAGCCGAG GTCTTTGCCG CTAACTCGTC AGTCTACAAA
GCCAAGCTCA AGGCTCTGGA TCAGGAGCTG CGCACGGCGA TTGCCACGCT GCCGGCCCGG
CAACGGCTGC TGGTGAGTTG TGAGGGGGCC TTCACTTATC TGGCAGCGGA TTACGGACTC
GAAGAGGCCT ATCTCTGGCC GGTGAATGCC GAAAGCGAGA TCACACCCAA ACGCATGGCA
CGGTTGATCG ACACGGTGCG GGAGCGGCAG GTGCCGGCCA TTTTCTGTGA AAGCACCGTG
AGCGATAAAG CCCAACGGGA GGTGGCAGCG GCGGCCGGAG CACGATTCGG TGGCACCTTT
TACGTGGATT CCCTCTCATC TCCGGACGGC CCTGCACCAA CCCTGTTGGA ACTGCAGCGG
CACAATGTGG GTCTGATCCT CAAGGGCCTG GACCTGTCCG AGAGCAACCG CTGA
 
Protein sequence
MQRFPAAAAV VLGPTGAILD RPDLSSLHLL SWKRSAAVLL VVMGVLLASC RSRDKNIAAD 
SRPQVLTTFT VLADLARNVA GDRMQVASIV KPGAEIHGYQ PTPSDIERAS KADLIVENGL
GLELWAQRFT AAAGDVPTIT LSEGMEPLLI KEDAYSGKPN PHAWMSPQRT MGYVDHLERA
FSQLDPAGAE VFAANSSVYK AKLKALDQEL RTAIATLPAR QRLLVSCEGA FTYLAADYGL
EEAYLWPVNA ESEITPKRMA RLIDTVRERQ VPAIFCESTV SDKAQREVAA AAGARFGGTF
YVDSLSSPDG PAPTLLELQR HNVGLILKGL DLSESNR