| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1462 |
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| Symbol | |
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| ID | 3736054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1369982 |
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| End bp | 1371637 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637776055 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_381771 |
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| Protein GI | 161353760 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0685513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCCT TTCAGGACCT GTTCAATCAA CTGGATCAGG TCACGGGCAC CAAGGCCAAG
GTGCAGGCGC TGGTGGACCA CTTTCAGGGG GTCGAGCCAG GCGAAGCGGC CTGGGCGTTG
ACGCTGCTGT TGGGCAAACG ACGCCGGCGG CTGATCACCG GTCGCCGACT CCGCGACATC
CTGCGAGACC GCGGCGGTCT TCCGGATTGG CTGATCGACG ACTGCTATGG CCAGGTGGGC
GACTCAGCCG AAACCATCAG CCTGCTCTGG CCTGCCGTGC AAGAGCGGGT GGAAGCGACC
GATCCCGGTC TACCCAGAGC TGAAGGGGAT AGGCCCCTGA GCTGGTGGAT GGACACACTG
CTGCCGGCCA TCAGCACCAG AAGCGATGAG GACCAAGCCA ATGCGGTGAT CTGGCTGTGG
CATCGAACCC CGCTCGACCA GCACTTCATC GTCAACAAAC TGCTCACGGG AGGGTTCCGT
GTCGGCGTGT CGACGGGCCT GATCAGCCGC GCCATCGCCG AGGCGTTTGA TCTCGAGGAA
AGCCTGGTGG TGCAACGGCT GATGGGGGGC TTTGAGCCCT CGGCCGAGCG CTTCAGGCAA
CTCACCGACA GCGCAACCGC AGATGAACAC CGTTCCAGTG GCACCCCTTA CCCCTTTTAT
CTCGCCAGTC CCCTGGAGCC CGAACGACTG CGGGAGACAT CCGCAAACGA ATGGCAACTT
GAGTGGAAAT GGGATGGGAT CCGCGGTCAG CTGATCCACC GCGGTTCCGG CGTCTACCTC
TGGAGCCGTG GAGAAGAATT GGTCAACGAG AGCTTCCCTG AGCTGGTTGA GGTGGCTCAG
GCCTTGCCGT CAGGAAGCGT TCTGGACGGC GAACTGATCT GCTGGCAGCA GAACGCAGCT
CAACCACTTG GTTTTGATCA GCTGCAACGA CGTCTCGGCC GCAAAACCGT TGGGGCAACA
TTGAAACGCG ACTGCCCGAT GCGGTTCATC GCCTACGACC TGCTGGAACA TCAGGGCACG
GACATTCGCC AGCTGGGATT ACGGCAGCGT CAGCAGCATC TGACTCAGCT GCTGGGCAGC
ATCGAGCATC CTGATTCGTG GCGGTTGAAG CAGAGCCCGT CCTGGTCGAT CAACACCTGG
GAAGAGCTTG AGAAACAACG GAACCTGGCG CGTCAACACA ACGCCGAAGG GCTGATGCTC
AAACAAGCGG ATTCGCCTTA TCTCAGCGGG CGCAAACGCG GCAACTGGTG GAAACACAAG
CTGGAGCCGA TGACCCTCGA TGCGGTGCTC CTGTATGCCC AGGCCGGCAG TGGGCGACGC
GCCAACCTCT TCACCGATTA CACCTTCGGC CTGTGGAGCA ACACGGAAGA ACCGCAGCTG
GTGACTTTTG CCAAGGCTTA TTCAGGCCTC AATGATGCCG AAATCCTCGA ACTGGACCGC
TGGATCCGCC GCAACACCCT GCAGCGCTTC GGGCCAGCAC GGTCCCTGAA AACCGAGCTG
GTGTTTGAAA TCGGCTTTGA GGGCATCCAC CCCTCAAAAC GCCATAAATC AGGCATCGCC
GTGCGTTTCC CGCGCATCCT GCGCTGGCGA CGCGACAAAC CTGCCGATGA AGCGGATTCA
CTCCAGACCG CGATGGCATT GATCGAGAAC CGTTGA
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| Protein sequence | MRAFQDLFNQ LDQVTGTKAK VQALVDHFQG VEPGEAAWAL TLLLGKRRRR LITGRRLRDI
LRDRGGLPDW LIDDCYGQVG DSAETISLLW PAVQERVEAT DPGLPRAEGD RPLSWWMDTL
LPAISTRSDE DQANAVIWLW HRTPLDQHFI VNKLLTGGFR VGVSTGLISR AIAEAFDLEE
SLVVQRLMGG FEPSAERFRQ LTDSATADEH RSSGTPYPFY LASPLEPERL RETSANEWQL
EWKWDGIRGQ LIHRGSGVYL WSRGEELVNE SFPELVEVAQ ALPSGSVLDG ELICWQQNAA
QPLGFDQLQR RLGRKTVGAT LKRDCPMRFI AYDLLEHQGT DIRQLGLRQR QQHLTQLLGS
IEHPDSWRLK QSPSWSINTW EELEKQRNLA RQHNAEGLML KQADSPYLSG RKRGNWWKHK
LEPMTLDAVL LYAQAGSGRR ANLFTDYTFG LWSNTEEPQL VTFAKAYSGL NDAEILELDR
WIRRNTLQRF GPARSLKTEL VFEIGFEGIH PSKRHKSGIA VRFPRILRWR RDKPADEADS
LQTAMALIEN R
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