Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1440 |
Symbol | |
ID | 3736032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1352341 |
End bp | 1352997 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637776033 |
Product | ATP-dependent Clp protease proteolytic subunit |
Protein accession | YP_381749 |
Protein GI | 78212970 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.53484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.130722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAA CCCTAGCGCC GCAGACATCG CCGTTAGGAT TGCTCGACCC TACTGTTGCT CAGATGATCC CCATTGTGAT TGAGGAGTCC GGCCGGGGAG AAAGGGCCTT TGACATTTAT TCCAGGCTTC TGCGCGAGCG AATCATCTTC CTTGGTGAGG CCGTCACCAG TGACTCCGCC AACCGGATCG TGGCCCAGAT GTTGTTCCTC GAAGCTGAGG ACCCCGAAAA AGATATCTAC CTCTACATCA ACTCTCCCGG AGGTTCGGTC TACGACGGCC TCGGCATCTT CGACACGATG CAGCACATCA AACCGGATGT GCACACGGTG TGTGTCGGCC TCGCCGCAAG CATGGGAGCT TTCCTGCTCT GTGCCGGCAC CAAGGGCAAG CGAAGCAGCC TGCAGCACTC CCGGATCATG ATTCATCAGC CGTTGGGTGG TGCCCAGGGT CAAGCCAGCG ACATCCGCAT TCAGGCGGAC GAGATCCTCT TCCTGAAAGA ACGCCTCAAC AAGGAGCTGT CCGATCGCAC TGGGCAAACC CTTGATCGGA TCCAACAGGA CACCGACCGT GACTTCTTCA TGTCACCCAC CGAAGCGATG AACTACGGCT TGATTGATTC GGTGATCGAC AAGCGTCCAG TTCAGGCGGT CGCTTGA
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Protein sequence | MAETLAPQTS PLGLLDPTVA QMIPIVIEES GRGERAFDIY SRLLRERIIF LGEAVTSDSA NRIVAQMLFL EAEDPEKDIY LYINSPGGSV YDGLGIFDTM QHIKPDVHTV CVGLAASMGA FLLCAGTKGK RSSLQHSRIM IHQPLGGAQG QASDIRIQAD EILFLKERLN KELSDRTGQT LDRIQQDTDR DFFMSPTEAM NYGLIDSVID KRPVQAVA
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