Gene Syncc9605_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1440 
Symbol 
ID3736032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1352341 
End bp1352997 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content57% 
IMG OID637776033 
ProductATP-dependent Clp protease proteolytic subunit 
Protein accessionYP_381749 
Protein GI78212970 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.53484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.130722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA CCCTAGCGCC GCAGACATCG CCGTTAGGAT TGCTCGACCC TACTGTTGCT 
CAGATGATCC CCATTGTGAT TGAGGAGTCC GGCCGGGGAG AAAGGGCCTT TGACATTTAT
TCCAGGCTTC TGCGCGAGCG AATCATCTTC CTTGGTGAGG CCGTCACCAG TGACTCCGCC
AACCGGATCG TGGCCCAGAT GTTGTTCCTC GAAGCTGAGG ACCCCGAAAA AGATATCTAC
CTCTACATCA ACTCTCCCGG AGGTTCGGTC TACGACGGCC TCGGCATCTT CGACACGATG
CAGCACATCA AACCGGATGT GCACACGGTG TGTGTCGGCC TCGCCGCAAG CATGGGAGCT
TTCCTGCTCT GTGCCGGCAC CAAGGGCAAG CGAAGCAGCC TGCAGCACTC CCGGATCATG
ATTCATCAGC CGTTGGGTGG TGCCCAGGGT CAAGCCAGCG ACATCCGCAT TCAGGCGGAC
GAGATCCTCT TCCTGAAAGA ACGCCTCAAC AAGGAGCTGT CCGATCGCAC TGGGCAAACC
CTTGATCGGA TCCAACAGGA CACCGACCGT GACTTCTTCA TGTCACCCAC CGAAGCGATG
AACTACGGCT TGATTGATTC GGTGATCGAC AAGCGTCCAG TTCAGGCGGT CGCTTGA
 
Protein sequence
MAETLAPQTS PLGLLDPTVA QMIPIVIEES GRGERAFDIY SRLLRERIIF LGEAVTSDSA 
NRIVAQMLFL EAEDPEKDIY LYINSPGGSV YDGLGIFDTM QHIKPDVHTV CVGLAASMGA
FLLCAGTKGK RSSLQHSRIM IHQPLGGAQG QASDIRIQAD EILFLKERLN KELSDRTGQT
LDRIQQDTDR DFFMSPTEAM NYGLIDSVID KRPVQAVA