| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1355 |
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| Symbol | |
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| ID | 3736138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1265880 |
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| End bp | 1269506 |
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| Gene Length | 3627 bp |
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| Protein Length | 1208 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637775947 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_381664 |
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| Protein GI | 78212885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.290102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.418289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGTGA CGCAGGCAGA TCGGCAAGTC ACCACCTCTG CATTTCTCGA CCACCTGCAT
GGTCCGCAGC GTCCTGTGCT GGTTTTCGAC GGCGCCACAG GCACCAGCCT TCAGGGGCTG
GGGCTCACGG CAGAAGATTT CGGTGGTCCT GACCTGGAGG GCTGCAACGA GAACCTTGCG
GTCACCAAAC CGGATGCGGT CAAGGCTGTG CATCGCCAGT TCCTCGAGGT GGGCTGCGAT
GTCATCGAGA CCGACACTTT CGGCGCTGCG TCGATTGTGC TGGCGGAATA CGGCCTGGAA
GACAAGGCCT TCGAGCTCAA CAAGCGGGCT GCGGAGCTGG CCCGGGAAAT GGCTGATGAA
TTCAGCACCC CTGAAAAGCC CCGCTTCGTG GCGGGCTCCA TGGGCCCCAC CACCAAGTTG
CCCACCCTCG GCCACATCGA TTTCGACACG ATGCGGGATT CGTTCCGCGA GCAGGCTGAG
GGACTGATCG CCGGCAACGT CGACCTGTTC ATCGTCGAAA CCTGTCAGGA CGTGCTGCAG
ATCAAGGCAG CGCTCCAGGG CATCGAAGAG GCCTTTGCCG CCACTGGTGA ACGGCGGGCC
CTGATGGTGT CCGTCACGAT GGAAACCACC GGCACCATGC TCGTCGGCAC GGACATCGCT
GCCGTGGTGT CGATCCTTGA ACCGTTTCCG ATCGACATCC TCGGCCTCAA CTGCGCCACT
GGTCCGGAGC AGATGAAGGA GCACATTCGC TATCTCTCCG AGCATTCCCC CTTCACCGTC
AGCTGCATTC CCAATGCCGG TCTGCCGGAA AACATTGGCG GTGTGGCCCA TTACCGCCTC
ACGCCGGTGG AGCTGAAGAT GCAGCTGATG CACTTCGTTG AAGACCTCGG CGTGCAAGTG
ATCGGTGGCT GCTGCGGCAC CACTCCAGCC CACATCGGCA GCCTTGCGGA ACTGGCGCAG
GAGCTCAAGC CGGCTGAACG CCCCTCCCGC TGGGACCGCG CCAGCGCAAA GGATGTGCGA
CCTAGCCCCA ATTACGAGCC CGCTGCCTCA TCGATCTACG GCGTCACGCC GTACCACCAA
GATAATTCTT TCCTGATCAT TGGAGAGCGG CTCAATGCCA GCGGCAGCCG CAAGGTGCGT
GAACTGCTGG CGGAGGAAGA CTGGGACGGG CTGGTGTCGG TGGCCCGCGG GCAGGTGAAG
GAGAACGCCC ACGTGCTCGA CGTCAATGTC GACTACGTCG GTCGCGATGG CGAACGGGAC
ATGCACGAGC TGGTGAGCCG TCTGGTCACC AACGTCAACC TGCCCCTGAT GCTCGACTCC
ACCGAGTGGC AGAAGATGGA AGCGGGCCTC AAGGTGGCCG GGGGCAAGTG CATCCTCAAC
TCCACCAACT ACGAAGACGG TGACGAGCGC TTCTTCAAGG TTCTGGAGCT GGCCCGCCGC
TACGGCGCCG CTGTGGTGGT TGGCACGATC GACGAAGACG GTATGGCCAG AACGGCCGAG
AAGAAGTTCG CCATCGCCCA GCGGGCCTAT CGCGATGCTC TGGAGTTCGG CATCCCTGCC
CACGAGATCT TCTACGACCC CCTAGCTCTT CCCATCTCCA CTGGCATTGA GGAAGACCGC
CTGAATGGTC GCGCCACCGT GGATGCCATC CGGATGATCC GGGAGAACCT TCCCGGTGTG
CACGTGGTGC TCGGGGTCAG CAATGTGAGT TTCGGCCTGT CACCGGCAGC ACGGATCACG
CTGAACTCGG TCTTCCTCCA CGACTGCTGT GAAGCCGGCA TGGATTCGGC CATCGTCAGC
CCCGCCAAGA TTCTTCCGTT GATCAAGATC AGCGATGACC ACCAGAAGGT GTGTCGTGAT
CTGATCAATG ACAACCGCCG TTTCGAGGAC GGCATCTGCG TCTACGACCC GCTCACCGAA
CTCACCAAGT TGTTCGAGGG AGTCAGCACC AAGGAAGCCC GTGCTTCAGG CCCCTCGCTG
GCGGATCTGC CGATTGAGGA ACGGCTTAAG CAGCACATCA TTGATGGCGA GCGCATCGGA
CTTGAGCCCT CCTTGGACGA GGCGCTGCAG ACCTATCCCC CTCTGCAGAT CATCAACACC
TTCCTGCTGG ATGGCATGAA GGTGGTGGGT GAATTGTTCG GCAGCGGCCA GATGCAGCTC
CCCTTCGTGC TGCAAAGCGC CGAGACGATG AAATCCGCCG TGGCACACCT CGAGCCGCAC
ATGGAAAAAA GCGAGGGCGA GAGCACGAGC AAGGGCAAGT TCCTGATCGC CACGGTGAAG
GGCGATGTCC ATGACATCGG CAAGAACCTG GTGGACATCA TCCTCACCAA CAACGGCTAC
GAGGTGATCA ACCTCGGCAT CAAGCAGAGC TGTGAAGCCA TCATTGAGGC CCAGCGTGAA
CATCAGGCCG ATTGCATCGC CATGAGCGGT CTGCTGGTGA AATCCACGGC CTTCATGAAA
GACAATCTCC AAGCTTTCAA CGATGCGGGG ATTGATGTTC CTGTGATCCT CGGCGGTGCG
GCCTTGACGC CACGCTTCGT GCAGAAGGAC TGCCGCGAGG TGTACGACGG CAAGGTGATC
TACGGCCGTG ATGCCTTCGC TGATCTGCGC TTCATGGATG CCTTGATGGA TGCGAAGCGC
AGCGAGAACT GGACCAACAC CAAGGGCTTT CTGGCTGATG CTCCCCAAGG GGTTGGCCTG
GATGAAGAGT CGACAACCTC CGAGAAGGCT GAGGAGACAT CCATCTCCGC AACGGATGCT
CCAGCCGCAG ATCTGCCGCC GGTGAGCTCA GATCGATCCG ACGCCGTTCC CGCTGAAGCC
GCACCGCTGG CGCCCTTCCT CGGCTCTTCG GTGATCACTG AGGCCGACAT CGATATCGCC
GAGGTCTTCC ACTACCTCGA CCGCAATGCT CTCTTCGCAG GCCAGTGGAT GCTCCGAAAA
ACCAAGGAGC AGAGCCGAGA CGACTATGAG GCGATGCTGG CGGAGAAGGC AGACCCGGTG
CTGAAGGAGT GGATGAAGCG CTGCATGGAT GAGTCACTGT TGACTCCCCG TGCGGTGTAC
GGCTACTTCC CTGTGGGACG CGATGGCAAC AGCCTTCGGG TGTTCGATGC CGACGGCACG
CGGGAACTCG GGCGTTTTGA GCTTCCCCGT CAACGGTCTG GCAACCGCTT CTGCATTGCC
GATTTCTTCA ACGATCTGGA CGCTGAGGGA GGTCCGACGG ATGTGCTGCC GATTCAGGCC
GTGACCATGG GCCAGAAGGC CTCTGTGGTG GCTCAGGAGC TGTTCAAGGG CGATCGCTAC
AGCGACTACC TGTACTTCCA TGGCCTTGCG GTGCAGATGG CCGAAGCGAT GGCCGAATGG
GTGCATGCAC GGATTCGTTC GGAGCTCGGC TTCGCTGATC CCGACGGCAT GGCCCTGCGG
GATGTGCTGG CGCAGCGATA CCGCGGTAGC CGGTACTCCT TCGGCTACCC CGCCTGTCCC
AATGTGGCTG ATTCCAGGCA GCAGCTGGAC TGGCTCGGCG CTGAGCGCAT CGGCTTGAGC
ATGGACGCTA GTGACCAGCT CGAGCCTGAG CAGAGCACCA CAGCATTGGT GGCTCTCCAC
TCCCAGGCTC GTTATTTCAG CGCCTGA
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| Protein sequence | MVVTQADRQV TTSAFLDHLH GPQRPVLVFD GATGTSLQGL GLTAEDFGGP DLEGCNENLA
VTKPDAVKAV HRQFLEVGCD VIETDTFGAA SIVLAEYGLE DKAFELNKRA AELAREMADE
FSTPEKPRFV AGSMGPTTKL PTLGHIDFDT MRDSFREQAE GLIAGNVDLF IVETCQDVLQ
IKAALQGIEE AFAATGERRA LMVSVTMETT GTMLVGTDIA AVVSILEPFP IDILGLNCAT
GPEQMKEHIR YLSEHSPFTV SCIPNAGLPE NIGGVAHYRL TPVELKMQLM HFVEDLGVQV
IGGCCGTTPA HIGSLAELAQ ELKPAERPSR WDRASAKDVR PSPNYEPAAS SIYGVTPYHQ
DNSFLIIGER LNASGSRKVR ELLAEEDWDG LVSVARGQVK ENAHVLDVNV DYVGRDGERD
MHELVSRLVT NVNLPLMLDS TEWQKMEAGL KVAGGKCILN STNYEDGDER FFKVLELARR
YGAAVVVGTI DEDGMARTAE KKFAIAQRAY RDALEFGIPA HEIFYDPLAL PISTGIEEDR
LNGRATVDAI RMIRENLPGV HVVLGVSNVS FGLSPAARIT LNSVFLHDCC EAGMDSAIVS
PAKILPLIKI SDDHQKVCRD LINDNRRFED GICVYDPLTE LTKLFEGVST KEARASGPSL
ADLPIEERLK QHIIDGERIG LEPSLDEALQ TYPPLQIINT FLLDGMKVVG ELFGSGQMQL
PFVLQSAETM KSAVAHLEPH MEKSEGESTS KGKFLIATVK GDVHDIGKNL VDIILTNNGY
EVINLGIKQS CEAIIEAQRE HQADCIAMSG LLVKSTAFMK DNLQAFNDAG IDVPVILGGA
ALTPRFVQKD CREVYDGKVI YGRDAFADLR FMDALMDAKR SENWTNTKGF LADAPQGVGL
DEESTTSEKA EETSISATDA PAADLPPVSS DRSDAVPAEA APLAPFLGSS VITEADIDIA
EVFHYLDRNA LFAGQWMLRK TKEQSRDDYE AMLAEKADPV LKEWMKRCMD ESLLTPRAVY
GYFPVGRDGN SLRVFDADGT RELGRFELPR QRSGNRFCIA DFFNDLDAEG GPTDVLPIQA
VTMGQKASVV AQELFKGDRY SDYLYFHGLA VQMAEAMAEW VHARIRSELG FADPDGMALR
DVLAQRYRGS RYSFGYPACP NVADSRQQLD WLGAERIGLS MDASDQLEPE QSTTALVALH
SQARYFSA
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