| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1340 |
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| Symbol | |
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| ID | 3736123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1255563 |
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| End bp | 1256960 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637775932 |
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| Product | 23S rRNA (uracil-5-)-methyltransferase RumA |
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| Protein accession | YP_381649 |
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| Protein GI | 78212870 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.308627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAG TCGATAGCCC GCACAGCAGT GAACCGCGGC CCGGGCTCAC GATCGAGCTC
GAGGCTGTTG ACCTGGATCG CGACGGCAAG GGTCTGGCCC GTTGGAACAA CTGGGTGATC
GTCGTTGCTG ATCTTTTGCC GGGGGAGCGT GCCACCGTTC AGCTGCAGCA ACGTCAGAAG
TCGCGCTGGT TGAGCCGTCG TGTGGACCAG ATCTCGTTTT CCGCAGAGCG GCGTCGCCCT
CCCTGCATCC TTGCCGATGA CTGTGGTGGT TGCACCCTGC AACGTCTGGA CGACTCTGCA
CAAACCCGTT GGAAAGCCCA GCAGCTTCAA CAGACCATGC AGCGCATTGG GGGCATTGAT
GTTGCCCCTG CAGCCACCAT TGTTGATGCT GAACGCTGCT TTGGTTACCG CAACAGGGCC
TTGATCCCTC TAAAGCGGGA TCAGAACGGA CGCTTGAAGG CCGGCTACTT CCGACCGAAG
ACCCACAAGA TTGTCAATCT GAACCACTGC CCGGTGCTCG ATCCACGCCT GGACACGTTT
GTGGAGCCTC TCAAGCAAGA CCTCGATTCA GGTGGGTGGC CGGCGGACCA TGACCTGCTC
GAAGCCCAGG GTCTGCGCCA TCTCGGACTT CGTCTGGCCA GCGCAACGGG AGACGTGTTG
ATCACGTTGA TCAGCAGCCA TGCTCAGCTT CGAGGCCTAG AGGATCTCGC TCAGAGCTGG
GTGGAGCGTT GGCCTGAGGT GAAAGGGGTG TGCCTTAACC TTCAACCCGA GGCCAACAAC
CTGGTGCTTG GTCGCAAAAC CCATTGCCTC GCTGGAGTTC CCACCATCGA GGAACAGTTC
TGCGGCATCA AGCTCGCCCT CAGCAGCACC ACCTTTGTTC AGGTGAACAC GCCGCAGGCG
GAACGGATCG TTCAGCTGCT CACCGACTGG CTCTTGAACC AGTGCGCCGG CGCACTGGTG
GTCGACGCTT ATTGCGGCGT CGGAACCATT GCCCTGCCCC TGGCCAAGGC CGGTTTTGAT
GTTCAGGGCC TGGAACTCAA TCCCGACTCG GTGGAGCAGG CCCGGCTGAA TGCCATGCAT
AACGGCCTTT CCTCCCGCTG TGCATTTCAT GCCGGCGATG TTGCAGACCT CCTCGCTGCG
CATCTGGACG ACTGTCAGGC GCTGGTGTTG GATCCACCGC GCCGGGGTCT GGATCGACGC
GTGGTGGACA GCATCCTTGA GCAGCCTCCT GTCGTGGTGG TCTACCTCAG CTGTGACCCC
GCCACGCAAG CACGGGATCT GAAAGCTTTG CTCGCTCCAT CAGGTTCCTA CGAGCTGGAG
GTGCTCCAGC CCGTGGACTT CTTCCCCCAG ACAACGCACC TTGAGTCGTT GGCGCTGCTG
AAACGGGTCA GCTCCTGA
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| Protein sequence | MTKVDSPHSS EPRPGLTIEL EAVDLDRDGK GLARWNNWVI VVADLLPGER ATVQLQQRQK
SRWLSRRVDQ ISFSAERRRP PCILADDCGG CTLQRLDDSA QTRWKAQQLQ QTMQRIGGID
VAPAATIVDA ERCFGYRNRA LIPLKRDQNG RLKAGYFRPK THKIVNLNHC PVLDPRLDTF
VEPLKQDLDS GGWPADHDLL EAQGLRHLGL RLASATGDVL ITLISSHAQL RGLEDLAQSW
VERWPEVKGV CLNLQPEANN LVLGRKTHCL AGVPTIEEQF CGIKLALSST TFVQVNTPQA
ERIVQLLTDW LLNQCAGALV VDAYCGVGTI ALPLAKAGFD VQGLELNPDS VEQARLNAMH
NGLSSRCAFH AGDVADLLAA HLDDCQALVL DPPRRGLDRR VVDSILEQPP VVVVYLSCDP
ATQARDLKAL LAPSGSYELE VLQPVDFFPQ TTHLESLALL KRVSS
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