| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1243 |
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| Symbol | |
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| ID | 3736447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1164759 |
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| End bp | 1166567 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637775833 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_381553 |
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| Protein GI | 78212774 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.590892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA ACAGCAAGGC GATCCGCAAC ATCGCGATCA TCGCCCACGT TGACCACGGC
AAGACGACTC TGGTCGATTC GCTGTTGGCG CAGTCAGGAA TTTTCCGCGA CAACGAGGCC
GTCCCCACCT GTGTGATGGA CTCCAACGAC CTGGAGCGTG AGCGGGGCAT CACGATCCTG
TCCAAGAACA CGGCTGTCAC CTACAACGAC ACCCGGATCA ACATCGTTGA CACGCCTGGG
CACGCCGATT TCGGTGGTGA AGTGGAGCGG GTGCTGGGCA TGGTCGACGG TTGCCTGCTG
ATCGTTGATG CCAACGAGGG GCCGATGCCC CAAACCCGCT TTGTGTTGAA GAAAGCCCTT
GAGCAGGGTC TGCGTCCGAT CGTGTTCGTC AACAAGATCG ACCGTGCCCG GGTGGATCCC
GAGACCGCCG TCGACAAGGT GCTCGATCTG TTCATCGAAC TCGGCGCTGA CGATGATCAG
TGCGATTTCC CCTACCTGTT CGGCAGCGGT CTGGGAGGGT TCGCCAAGCC CGACATGAAG
ACCGACAGCG ACAACATGCG TCCGCTGTTC GATGCAATCC TGCGCCACGT TCCGCCCCCG
GTTGGTGATC CGGAAAAGCC CCTTCAGCTG CAAATCACCA CCCTTGATTA TTCCGACTTC
CTGGGTCGGA TCATCATTGG TCGCGTTCAC AACGGAAAAA TCAAACATGG TCAGAACGCT
GCACTGATCA AGGACGACGG CAGCATTAAG AAGGGTCGCA TCAGCAAACT TCTTGGCTTC
GAAGGTCTGC AGCGCGTTGA GATCGAAGAG GCTTCCGCCG GTGATCTGGT GGCCGTTGCT
GGTTTTGACG ACGTCAACAT CGGTGAAACC ATCGCCTGCC CGGATGAGCC CACCGCTCTG
CCGCTGATCA AGGTGGATGA GCCCACCCTC CAGATGACCT TCGTCGTCAA CGATTCACCC
TTCGCTGGCA AGGAAGGCAA GTTCGTCACG AGCCGTCAGG TGCGTGACCG CCTTCAGCGT
GAGTTGCTCA CCAACGTGGC CTTGCGTGTG GAAGACACCG ATTCACCAGA CCGTTTTGCG
GTGAGTGGTC GCGGTGAGCT GCACCTCGGC ATCCTGATCG AGACCATGCG CCGTGAGGGT
TATGAGTTCC AGGTGTCCCA ACCGCAGGTG ATCTACCGCA CCATCGATGG CACCCCTTGT
GAGCCGGTGG AAACTCTGGT GATGGATGTG CCTGAACCTG CCGTGGGCAG CTGCATCGAA
AAACTGGGCA CCCGCAAGGG CGAGATGCAG AACATGGAAA CCAGCGCTGA TGGCCGCACC
CAGCTGGAGT TCATCGTTCC CTCCCGCGGT CTGATCGGTT TCCGCGGTGA ATTCATCCGG
GCCACCCGCG GCGAAGGAAT CATGAGCCAT TCCTTCTATG AGTACCGGCC GATGATGGGT
GAATTCGACA CCCGCCGGAA CGGTGTGCTG ATCGCCTTCG AAGAGGGAAC GGCCACGTAC
TATGCCCTCA AGAACGCCGA GGATCGCGGC CAGTTCTTCA TCAGCCCGGG CACGAAGGTG
TACAAGGGAA TGATCATCGG GGAATACAAC CGGCCGCAAG ACCTTGAAAT CAACGTCTGC
AAGACCAAGC AGCTCACCAA CATGCGTTCA GCTGGCGCTG AGGAACTGGA CACGCTGCAA
GCACCGGTTC AGATGACGCT GGAGCGCGCA TTGGAATACA TCGGCCCCGA CGAGATGCTC
GAAGTCACGC CCGAGTCGAT CCGTCTGCGC AAACTTCCCG GCAAGAAGCC GGCCAAGTCC
AAGCGCTGA
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| Protein sequence | MSANSKAIRN IAIIAHVDHG KTTLVDSLLA QSGIFRDNEA VPTCVMDSND LERERGITIL
SKNTAVTYND TRINIVDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL
EQGLRPIVFV NKIDRARVDP ETAVDKVLDL FIELGADDDQ CDFPYLFGSG LGGFAKPDMK
TDSDNMRPLF DAILRHVPPP VGDPEKPLQL QITTLDYSDF LGRIIIGRVH NGKIKHGQNA
ALIKDDGSIK KGRISKLLGF EGLQRVEIEE ASAGDLVAVA GFDDVNIGET IACPDEPTAL
PLIKVDEPTL QMTFVVNDSP FAGKEGKFVT SRQVRDRLQR ELLTNVALRV EDTDSPDRFA
VSGRGELHLG ILIETMRREG YEFQVSQPQV IYRTIDGTPC EPVETLVMDV PEPAVGSCIE
KLGTRKGEMQ NMETSADGRT QLEFIVPSRG LIGFRGEFIR ATRGEGIMSH SFYEYRPMMG
EFDTRRNGVL IAFEEGTATY YALKNAEDRG QFFISPGTKV YKGMIIGEYN RPQDLEINVC
KTKQLTNMRS AGAEELDTLQ APVQMTLERA LEYIGPDEML EVTPESIRLR KLPGKKPAKS
KR
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