Gene Syncc9605_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1240 
Symbol 
ID3735833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1159945 
End bp1161312 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content59% 
IMG OID637775830 
Productgeranylgeranyl reductase 
Protein accessionYP_381550 
Protein GI78212771 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02028] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family
[TIGR02023] geranylgeranyl reductase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.525757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAG TTGCGGTGAT CGGTGGTGGC CCCAGTGGCT CCTGTGCTGC CGAAATTCTG 
GCCAAGGCGG GAATTGAGAC TTGGCTATTC GAGCGCAAAC TCGACAACGC CAAACCCTGT
GGTGGGGCTA TTCCGCTCTG CATGGTCGAG GAGTTTGACC TGCCCGACGA AATCATCGAC
CGAAAGGTCC GCAACATGAA GATGATTTCC CCTTCCAACA GGGAGGTGGA CATCAAACTC
GATCCCCTCG GCTACGACGA AAACGCCTAC ATCGGCATGT GCCGTCGTGA GGTGTTCGAT
GCCTTCCTGC GCAACCGTGC TGCCGATCTG GGCACAACCC TGATCAATGG ACTGGTGCAG
AAGATCGACA CCGGTGCAGA CCGTCAGGGC CCCTACACCA TCCATTACGC CGACTACAGC
GGCGGTGGCC CAACCGGTGA ACAGAAGACC CTGGCTGTGG ATCTGATCAT TGGTGCCGAT
GGCGCCAACT CCCGGGTGGC GAAAGCCATG GACGCCGGGG ATTACAACGT GGCCATCGCC
TTCCAGGAGC GGATCAAGCT TCCTGCTGAG GAGATGACCT ACTACGAAAA TCTGGCTGAG
ATGTACGTCG GAACAGACGT CTCACCTGAC TTCTACGCCT GGGTGTTCCC CAAATACGAT
CACGTGGCCG TTGGAACGGG AACCATGCAG CAGAACCAGA GCCTAATCAA AGGTCTGCAA
AGGGGCATCC GGGAGCGGGC CAACAAGCGT CTGTTCCAGG GTGAAGTGAT CAAGGTGGAA
GCCCACCCGA TTCCTGAGCA CCCCCGTCCC CGTCGCGTCG TGGGCCGCAT GGCGCTAGTG
GGCGATGCCG CCGGCTACGT CACCAAGAGC TCCGGTGAAG GCATCTACTT CGCAGCCAAG
AGCGGCCGGA TGTGTGCCGA AGCGATTGTG GAAATTTCCA ACAACGGTGC TTCCATCCCC
ACTGAGAAGC AGATCAAGTC GACCTACCTC AAGCGCTGGG ACCGCAAATA CGGCGCCACT
TATGTGGTGC TCGATATCCT GCAGCGAATC TTCTACCGCA ACGACGCTGC CCGGGAAGCC
TTTGTCGAAA TGTGCGACGA CAAGGACGTG CAGAAGCTGA CCTTCGACAG CTACCTGTAT
AAGCGGGTGG TGATGATGAA CCCCTGGCAG CAGATCAAGC TGACCCTCCG CACCCTGGGC
AGCCTGATCC GGGGCGAGGC CCTTGCTCCC TCCGATTACA ACCCTGTTCC TTCGGCCGTT
GGCCGTTCCG ATGGCGATTT CCTAGCGGAG GAAGCTGCCC AGCAGATCAA GGCTCAGGCT
GGCGAATCCA AGGGTTCCGA GTGGAAGGAA AAGGCCGGCG TTTCCTGA
 
Protein sequence
MLQVAVIGGG PSGSCAAEIL AKAGIETWLF ERKLDNAKPC GGAIPLCMVE EFDLPDEIID 
RKVRNMKMIS PSNREVDIKL DPLGYDENAY IGMCRREVFD AFLRNRAADL GTTLINGLVQ
KIDTGADRQG PYTIHYADYS GGGPTGEQKT LAVDLIIGAD GANSRVAKAM DAGDYNVAIA
FQERIKLPAE EMTYYENLAE MYVGTDVSPD FYAWVFPKYD HVAVGTGTMQ QNQSLIKGLQ
RGIRERANKR LFQGEVIKVE AHPIPEHPRP RRVVGRMALV GDAAGYVTKS SGEGIYFAAK
SGRMCAEAIV EISNNGASIP TEKQIKSTYL KRWDRKYGAT YVVLDILQRI FYRNDAAREA
FVEMCDDKDV QKLTFDSYLY KRVVMMNPWQ QIKLTLRTLG SLIRGEALAP SDYNPVPSAV
GRSDGDFLAE EAAQQIKAQA GESKGSEWKE KAGVS