Gene Syncc9605_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1200 
Symbol 
ID3735889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1122283 
End bp1122720 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content62% 
IMG OID637775790 
Productputative anti-sigma regulatory factor (serine/threonine protein kinase) 
Protein accessionYP_381510 
Protein GI78212731 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTCCA AGAGGTTTCG CTGGGCTGAG TTCACCTTGC CGTCGACCCT GCAGCTCGCT 
CCTCTGTTGG AGCTGCTTAC CGAGCCCGTC GGTTGTGTGC TCACCAGTCA GCGGATTGAG
CTGGGATTGC ATGAAGCCCT GGTCAATGCC GTTCGCCATG GCAACGCCGA GAACCCTGCT
AAGAAGCTCC GTGTTCGCCG CATCCTCACG CCCAATTGGA TGGTCTGGCA GGTTCAGGAT
GAGGGTTGCG GCCTTCCACA ACAGTCCCGC ACAGCAACCC TGCCGCCGGC CCTCGATGCT
CCCAGCGGCC GTGGGTTGTT TCTGATCCAT CAATGTTTTG ATGATGTGCG CTGGAGCCGC
CGGGGGAATC GCCTGCAGCT GGCCTGCCGC CGGCCCGTCA GTGACGCGGA CAGCCCGGAT
CCTTCAGTTC TCCTCTAA
 
Protein sequence
MPSKRFRWAE FTLPSTLQLA PLLELLTEPV GCVLTSQRIE LGLHEALVNA VRHGNAENPA 
KKLRVRRILT PNWMVWQVQD EGCGLPQQSR TATLPPALDA PSGRGLFLIH QCFDDVRWSR
RGNRLQLACR RPVSDADSPD PSVLL