Gene Syncc9605_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1183 
Symbol 
ID3736922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1109535 
End bp1109969 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID637775773 
Producthypothetical protein 
Protein accessionYP_381493 
Protein GI78212714 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCCGG CCCGTTGCCG GATTCTTGCG GTGGGCAAAG TGCGGCGTGG CTGGATTCAG 
GACGGCATTG ACCTCTATCT GAAACGGCTG CCTGGGTTGA CCATCAGCGA ACTGCGCGAC
AGCAACCCAG ACAAGGAAGC CGATGCCATC AGGGCAGCCC TGCGGCCCGA TGAAACCCTG
ATTGCGCTGA TGGAACAGGG CGACACCTTG GCGTCGGTTC CCTTCGCACA ACGACTCGAG
CAATTCGGCA ACCAGCGGCT GGCCTTTGTG ATTGGTGGAG CCGACGGTCT CACCGCCGAG
CTCAAGGCGC AGGCCCAATG GCGACTGAGC CTCTCCCCGA TGACCTTCCC CCACGAACTG
GCGCGGCTGA TGCTTGTGGA ACAACTGTTC CGGGCCCAAG CGATTGTCCA AGGCAGCCCC
TATCACCGCG CTTAG
 
Protein sequence
MNPARCRILA VGKVRRGWIQ DGIDLYLKRL PGLTISELRD SNPDKEADAI RAALRPDETL 
IALMEQGDTL ASVPFAQRLE QFGNQRLAFV IGGADGLTAE LKAQAQWRLS LSPMTFPHEL
ARLMLVEQLF RAQAIVQGSP YHRA