Gene Syncc9605_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1154 
Symbol 
ID3735612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1084860 
End bp1085270 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content62% 
IMG OID637775744 
Producthypothetical protein 
Protein accessionYP_381464 
Protein GI78212685 
COG category[S] Function unknown 
COG ID[COG1939] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.784455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGACT GGATACGCAA CCAGGGTCCC AGCGGCATCT ACGAACCGTT GGGACCACTG 
CAACTGGCTT GGATTGGCGA TGCCGTCTGG GAGCTGCACC AACGGCTGCG CCATGGAGCA
AGGCCTGGGC GCTCTGATCA ATTGCACCGG GCTGTGGTGG CCGATGTTCG TGCTGATGCC
CAGTCCCGCC TGCTGAGCTG GTTGGAAGCC CATGAACTTC TCAGTTCAGA GGAACTCGAC
CTGGTGCGTC GCGGCCGCAA CAGTGCCGGT CGGGGTCCAC GGCGTGCGGA CGCTGCGGTT
TATGGGAGGG CCACAGGATT TGAGACAATG GTGGGCTGGC TGTTTCTGAA CAAACCAGCC
CGGCTTGCGG AGCTCTTCGA TCACCTGGAG CAAGCCGGAT CCAACCCATA A
 
Protein sequence
MSDWIRNQGP SGIYEPLGPL QLAWIGDAVW ELHQRLRHGA RPGRSDQLHR AVVADVRADA 
QSRLLSWLEA HELLSSEELD LVRRGRNSAG RGPRRADAAV YGRATGFETM VGWLFLNKPA
RLAELFDHLE QAGSNP