Gene Syncc9605_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1109 
Symbol 
ID3735662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1043750 
End bp1044838 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content60% 
IMG OID637775700 
ProductElongator protein 3/MiaB/NifB 
Protein accessionYP_381421 
Protein GI78212642 
COG category[R] General function prediction only 
COG ID[COG2516] Biotin synthase-related enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.370435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC TTGGTCGCCT GGTCACGGAA TTGCAGGTGC ATGGCGTTCG GGTTGACCCT 
GTTAAGGGCA ACCCGGGACG ACGGGGAGGT GCGGGTCCCT CCGACCACCG TGCCTTGGAT
TTCGATGGCA CCACCGTGAT GGTGCCCGTC TACAACGATG CCTCCGCAGC GTCTCCCTAC
AAGTTGGCAT CCTCCGGTGC TGCTCTTGCA ATTGAGGGAC CAGAGCAGCA GTGCTCTCCA
GGGATCACAA CCCCACGGGA GCCATCGTTT TACGGCTTAA GCACAGCCGA CGGAATCTCC
TACCGATCGA TTGCCTTGCT GCACAGCAAG GATGTGTTGG CTACCACGTT GCTGCAGACC
TGCATTCGTT TTCGGGATCG ATCCCAGTCG TGCCAGTTCT GTGCGATTGA ACAGTCAATC
GTGGATGGGG CCTTGGTTCG CAAAACGCCC GAGCAGGTGG CGGAAGTGGC GGAAGCGGCT
GTCCGGCTGG ACGGGGTCAA GCAATTGGTG ATGACCACAG GAACGCCCAA CAGTGACGAT
CGCGGAGCCC GTCTGATGGC TGAAACCGCT GAAGCCGTCA AGCGTCGGGT GAATCTCCCG
ATCCAGGGCC AGTGTGAACC GCCGGAAGAT CCACGCTGGT ATCAGCGCAT GAAGGACTCT
GGAATTGACA GTCTCGGCAT GCACTTGGAG GTGGTGGAGC CGGATGTGCG GCGTCGGATC
CTTCCCGGGA AATCGGAGCT CAGTCTTGAG CGCTATTACG AGGCCTTCGC TGATGCCGTT
GCGGTGTTCG GTCGCGGTGA AGTGTCCACG TATCTGCTGG CCGGCCTGGG TGACAGCAAG
GAGACCTTGC TCGACTGCAG CCGACGTCTA ATTGAACTCG GGGTCTACCC CTTTGTGGTG
CCTTTTGTGC CGATCTCTGG CACACCCCTG GAGAGCCATC CATCACCGGA CAGCTCCTTC
ATGGTTGATG TGTATCAAGG TGTTGCCGCG ATGTTGAAAG CGGGGGATCT GCGCTCGGAG
CAGATGTCCG CCGGTTGTGC CAAATGCGGA GCTTGCTCCG CACTCTCGTT GTTCGAGCAG
GTGTCGTAG
 
Protein sequence
MSELGRLVTE LQVHGVRVDP VKGNPGRRGG AGPSDHRALD FDGTTVMVPV YNDASAASPY 
KLASSGAALA IEGPEQQCSP GITTPREPSF YGLSTADGIS YRSIALLHSK DVLATTLLQT
CIRFRDRSQS CQFCAIEQSI VDGALVRKTP EQVAEVAEAA VRLDGVKQLV MTTGTPNSDD
RGARLMAETA EAVKRRVNLP IQGQCEPPED PRWYQRMKDS GIDSLGMHLE VVEPDVRRRI
LPGKSELSLE RYYEAFADAV AVFGRGEVST YLLAGLGDSK ETLLDCSRRL IELGVYPFVV
PFVPISGTPL ESHPSPDSSF MVDVYQGVAA MLKAGDLRSE QMSAGCAKCG ACSALSLFEQ
VS