Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1079 |
Symbol | |
ID | 3737791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1018174 |
End bp | 1019175 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637775670 |
Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
Protein accession | YP_381391 |
Protein GI | 78212612 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0298231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAC AACTACGCAA CCTACTTTTC GCCGGCCTCG CCATCGTGCT GGCTGTCGCT TGCTCCAAGC CCTCCACACC GACGGTGGGC GGCACACCAA TTGTTTTGGG CTACAGCAAC TGGGCCGGAT GGTGGCCCTG GGCGATTGCC GTGGAGGAAA AGCTGTTCGA GAAGAACGGC GTAAATGTGG AGATGAAGTG GTTCGACGGC TACGTGCAGT CGATGGAAAC CTTCGCCGCT GGCAAGATCG ACGGCAACTC CCAAACCTTG AACGACACCA TTTCCTTCCT GCCGGGTGAA AACGGCGGTG AAGTGGTGGT TTTGGTGAAC GACAATTCTG CTGGCAATGA CCAGATCATT GCCGATGCCT CCATCACATC CATCACCGAT CTCAAAGGCA AGACCGTTGC TGTTGAGGAA GGCGTTGTGG ATGACTACCT GCTCAGCCTG GCCCTCAAGG ATGCGGGCCT GAGCCGCGAC GACGTGGTGA TCAAAGGCAT GCCCACCGAT CAGGCAGCCA CTGCATTCGC GGCAGGTCAG GTTGATGCCG TTGGTGCCTT CCCTCCCTAC ACAGGTACCG CCATGCAGCG AGAAGGTGCG CAGGTGATCG CCAGTTCCAA GGAGTATCCC GGTGCCATTC CTGATCTGCT CACCGTCAGC GGTGATCTGA TTAAGGAACG TCCCGACGAT GTGCAGAAGA TCGTGAAGAC CTGGTGGGAC GTTCGCGAGT TCATGGAAAA GAACCGCGAA AAATCCGAGG CGATCATGGC CAAGCGTGCC GGCATTCCCA CGGAGGAATA CGAGCAGTAC AAAGACGGCA CCCGCTTCTT CTCCATCGAG GAAAACCTCG AGGCCTTCAG CGCTGGTGAG GGAATGAAGT TCATGCCGTT CGCTGCTGAG TCGATGGCCG ACTTCATGGT TTCGGTGGGC TTCATCCCTG AGAAACCAGA CATGAGCAAG CTGTTTGACG ACAGCTTCAT CAAGAAGGTC GCCGCCTCCT GA
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Protein sequence | MTKQLRNLLF AGLAIVLAVA CSKPSTPTVG GTPIVLGYSN WAGWWPWAIA VEEKLFEKNG VNVEMKWFDG YVQSMETFAA GKIDGNSQTL NDTISFLPGE NGGEVVVLVN DNSAGNDQII ADASITSITD LKGKTVAVEE GVVDDYLLSL ALKDAGLSRD DVVIKGMPTD QAATAFAAGQ VDAVGAFPPY TGTAMQREGA QVIASSKEYP GAIPDLLTVS GDLIKERPDD VQKIVKTWWD VREFMEKNRE KSEAIMAKRA GIPTEEYEQY KDGTRFFSIE ENLEAFSAGE GMKFMPFAAE SMADFMVSVG FIPEKPDMSK LFDDSFIKKV AAS
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