Gene Syncc9605_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1050 
Symbol 
ID3737457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1000022 
End bp1000591 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content46% 
IMG OID637775641 
Producthypothetical protein 
Protein accessionYP_381362 
Protein GI78212583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0069459 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTGCAG CAAAGGGGAT AACCCTGCCA CCAATTGCTT TTCTAATGCT CATGACCCGA 
ACCATCAAAA CTTTGATTGC CATTGCCTCA ACATCACTGC TTGTCGGCAC ATTCCCTGCA
GTCGTAGGAG CGAATCCTGC CGGATTTACT AATGAGCCCG ATCCTGGCAT TAAAAAATTC
TTTGGGCCAC TCCCTATTGG TGTAAAAAGT AAACAATTGA GACCCTCTTC AACCAAGGGA
TTTAGTAATC AGCCCGATCC TGGCTTTAAT GGTGTTTTTA AGCCACTCCC CCGTGGCGTG
AAGATTAACG AATTGAGATC CTCTTCAAGC AAGGGATACA TTTCTGAGCC TGATGTAGGA
ACTTTTCTTC CCAAGGCCAA AAATCAGCAC ATGTATTTTC CACGTCTTCC AAGCAGAACC
AAAGGACTTA ATTCTATCGA CAGGGAGCCG TTCCCACGTA TTCCAAGCAA AAAAGCTAAA
GGGATTTTCT CTATCGACAG GGAGCCAATC CTACGTTCAC CAATCAAAAG AGCTAACAGG
TTCCACTCTT ATCCAGTGAC CGAGTGGTGA
 
Protein sequence
MCAAKGITLP PIAFLMLMTR TIKTLIAIAS TSLLVGTFPA VVGANPAGFT NEPDPGIKKF 
FGPLPIGVKS KQLRPSSTKG FSNQPDPGFN GVFKPLPRGV KINELRSSSS KGYISEPDVG
TFLPKAKNQH MYFPRLPSRT KGLNSIDREP FPRIPSKKAK GIFSIDREPI LRSPIKRANR
FHSYPVTEW