Gene Syncc9605_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0887 
Symbolera 
ID3736356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp857867 
End bp858802 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content64% 
IMG OID637775487 
ProductGTP-binding protein Era 
Protein accessionYP_381210 
Protein GI78212431 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCAA CTCCCCTGCC AGAGGATTAC CGCTCTGGCT TCATCGCACT GATCGGTCGC 
CCCAACGTGG GCAAATCCAC GCTGGTGAAT CAGCTGGTGG GGGAGAAGGT GGCGATCACA
TCGCCCGTGG CCCAGACCAC CCGCAACCGA CTGCGGGCCA TCCTTACCAC TGAGGTGGCC
CAGATGGTGC TGGTGGACAC GCCTGGCATC CACAAGCCCC ACCACTTGCT GGGGGAACGG
CTGGTGAAGA GTGCCCGCAG CGCCATCGGT GAAGTGGATC TGGTGGTGTT GCTGTTGGAG
GGGTGCGAGC GCCCGGGGCG CGGTGATGCC TTCATCGTGA ATTTGCTGCA GCAGCAGTCC
CTGCCGGTGC TGGTGGCCCT GAACAAGTGG GACAAGCTGG CGGAGGAGCA CCGCGCTGAA
GCGGAAGAGG CCTATGCCGC CCTGCTGCAG GAGACGAATT GGCCGGTGCA CCGCTGCAGC
GCCCTGTCAG GCGATGGCTG CGCAGATCTC ACAGCAGCGA TGGCGGCTCA GTTGCCCTTG
GGGCCACAGC TGTATCCGCC CGAGATGGTG AGTGATCAAC CGGAGCGGGT GCTGCTGGGG
GAACTCATTC GCGAGCAGGT GCTTCTGCAC ACGCGGGAAG AGGTGCCCCA CAGCGTTGCC
GTCACCATTG ATCGCGTTGA GGAGTTGCCG GCCAAGGGCA AGGGTGCGGG TCGGACGGCT
GTCTTGGCCA CGGTTCTGGT GGAACGGAAG AGTCAGAAGG GAATCCTGAT CGGCAAAGGC
GGGGCGATGC TCAAGACGAT CGGCCAGGGG GCGCGGCTGC AGATGCAGGT GCTGATTGAT
GGTCCGGTGT ATCTGGAGCT GTTCGTGAAG GTGGTGCCCG ATTGGCGCAG CAAACCGGCC
CGCTTGGCGG AGCTGGGTTA CACGGGAAAT CAATAA
 
Protein sequence
MHATPLPEDY RSGFIALIGR PNVGKSTLVN QLVGEKVAIT SPVAQTTRNR LRAILTTEVA 
QMVLVDTPGI HKPHHLLGER LVKSARSAIG EVDLVVLLLE GCERPGRGDA FIVNLLQQQS
LPVLVALNKW DKLAEEHRAE AEEAYAALLQ ETNWPVHRCS ALSGDGCADL TAAMAAQLPL
GPQLYPPEMV SDQPERVLLG ELIREQVLLH TREEVPHSVA VTIDRVEELP AKGKGAGRTA
VLATVLVERK SQKGILIGKG GAMLKTIGQG ARLQMQVLID GPVYLELFVK VVPDWRSKPA
RLAELGYTGN Q