Gene Syncc9605_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0828 
Symbol 
ID3737015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp797795 
End bp798559 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content46% 
IMG OID637775425 
Producthypothetical protein 
Protein accessionYP_381151 
Protein GI78212372 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.775057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.12363e-05 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCATCAA TCCTTATGGT CGCCTCAAAC CTCGGTGTTT GGGCAGAGGA ATTACAAGGT 
CCTTGGGATG TCCTCAACGA GAAGGGCCAC AACGTTACTC TTGCTACTGA GCAAGGTATC
AAGCCATTGC CTCATGTCAT CAGCATGGAT CCTGATGCAC TTGACACTGT TCAGAATATT
AAGGTCAATC CACAAAGTGT CGTTGATAGA TGTAAGGCTC TTTGGGCTTC AACTGCACTC
GATAATCCTA TTGCGATTAA AGATGCCAAG ATGAGTGACT ATGAAGCTAT TGTTCTTATC
GGGGGCCCAG GTGCCCCGTT AGACATGAAT GGCAATTCTA AGCTTCATAA GCTTCTTGTT
GATGCATTTG CCTCCGATAA ATTAATTGCA ACCATTTGCT ATGCCGTTGG AGGCCTTGTT
TGGGCTCGTA ATCCTGAGAC TGGTAAAAGT ATTATTGACG GTAAGGTTAT TTGTGCCCAT
CCCCGTGACT GGGACTTTAC AGATCCTCTG CCTTATCCAC TTGATGGTGC TCAATCTGGC
AATGCAGGGA CTGACCTCGT TACCCCTGGT TTTAATTACC CTGTTCAAAC AATCGTAGAA
TTGGCGGTTG GAGAGAAAGG CCGTGTTCTT TCTAACCCGT ACGTGCTTCG TAGTTGTCCC
TGCACTCACT ATGACTGGCC ATTTGTGACG GCGCTATCTG TTGAGTCATC CACCCCATTT
GGTTACATGA TCGACAATGC TCTGAATCAA AAATATGGCA AGTGA
 
Protein sequence
MASILMVASN LGVWAEELQG PWDVLNEKGH NVTLATEQGI KPLPHVISMD PDALDTVQNI 
KVNPQSVVDR CKALWASTAL DNPIAIKDAK MSDYEAIVLI GGPGAPLDMN GNSKLHKLLV
DAFASDKLIA TICYAVGGLV WARNPETGKS IIDGKVICAH PRDWDFTDPL PYPLDGAQSG
NAGTDLVTPG FNYPVQTIVE LAVGEKGRVL SNPYVLRSCP CTHYDWPFVT ALSVESSTPF
GYMIDNALNQ KYGK