| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0826 |
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| Symbol | |
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| ID | 3735389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 795607 |
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| End bp | 797115 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637775423 |
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| Product | cholesterol oxidase |
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| Protein accession | YP_381149 |
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| Protein GI | 78212370 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.492238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000140216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGAACACT CACCTGCTAT CGTCATCGGA AGTGGATTCG GTGGGTCTGT TGCTGCCCTG
CGGCTTGCTG AGGCTGGCAT CAAAACGCTT GTTATTGAGC GAGGTAAACG TTGGACCATC
CAGGATCCAA CAGTCAACGA AACCTTCAGT ACTTTTGACA GTCTTGATGG TCGTGCTGAG
TGGTTGAATG ATACTGGACG CTCAGAAACT CCTGCTTATG AAGGATTACC TATAACCAAG
CACACAGGAA TTATGGAATG TGTGAAGCAT GGTAAGTATA CTTTTTTGGT GGGTGCTGCT
GTCGGCGGTG GATCTCATTG TTATGGAGGG ATTCTGATTG AACCTCCCGA GGAGCTCTGG
AATAATCAAA TACCAATGAT TGATTATTCT GAAATGCGAG ATACGTACTT TCCAGTTGTT
CATAAGACAA TCGGCTCTTC ACCGATTCCT GATGATATTC TAAATTCTGA ATATTATTTA
GGATTAAGGT CGCTTGTTTC TCAGGCAGAA AAGGCTGGTT TTACGGAATG CAGTAGTACC
AACAATGGAA TGAAAGATGG TTATGTTAGA TTTAAGATGG GAATTGATTG GGATGCCACA
AGGGAAGAAA TTGCTAATAA ACGTGTGGCT TCACAGATTA AAGCTGAGTT CTGGTTTGGC
CAAAATAGCG GTGCTAAGCA AACTTTAGAC ACTAACTATC TAAAACTTGC CGAAGAAACT
GGATCAGTCG AGATCAGACC TCTTCATCTT GTCAATTCGA TTTCAGAGAA CGAAGATGGA
TTATACATCA TAGAAACATC GCGAATCAAC ACCAAGGGCG ATGTGATTGA GACGAAGCTT
TTTAGTTGCA ACCAATTGTT TTTGGCGGCT GGTGTTCTTG GCACCTGTGA GCTCCTCTTG
AGAGCACAAT CCAACAACAC AATTTCCAAT CTACCCTCTG AGCTTGGTTC CAACCTTGGC
AACGACGGAG ATACTTTTGC AATACGTACT GAACTTGATG AAAAAACCAA TCCCCATCTT
GGCGGACCTG GTGCTATTGC CATTTTGAAC TATGAGAATC CCATAAGACC CGCCATCATG
ATGCGCGCAC CACTTACCAA GTTTGATCGC TTGTTTCCCG ATCATAATGC TATTGGGACT
TTTATCTTTT CAAACTCTCA TCACCGCGGT CGCCTAACTT TTAATAAAGA TACCAATGGT
CTTGATATCG AATATGAGCT TGATTATGAT GCTATTTCAG CATCACAAGC GTTGCTCGAT
CGCTTCCAAC AGGCTAATGG TGGGGAGATT ATTCCTCCTG ATGTTCAAAT TACTGGTCAT
CAACTTGGAG GAGCTGCAAT GGGTAGTGTC TGTGATTCTT TTGGACGTGT CCAGGGTCAG
AAGGGCTTGT ATGTCGTTGA TGGATCTCTA ATTCCAGGTT CCAGTACCTG TATGAATCCA
GCTCTTACGA TTGCTGCAGT GGCCGAACGT GCTCTGCAGA ACATTATCCA GGAGGACATT
TTGGTTTAA
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| Protein sequence | MEHSPAIVIG SGFGGSVAAL RLAEAGIKTL VIERGKRWTI QDPTVNETFS TFDSLDGRAE
WLNDTGRSET PAYEGLPITK HTGIMECVKH GKYTFLVGAA VGGGSHCYGG ILIEPPEELW
NNQIPMIDYS EMRDTYFPVV HKTIGSSPIP DDILNSEYYL GLRSLVSQAE KAGFTECSST
NNGMKDGYVR FKMGIDWDAT REEIANKRVA SQIKAEFWFG QNSGAKQTLD TNYLKLAEET
GSVEIRPLHL VNSISENEDG LYIIETSRIN TKGDVIETKL FSCNQLFLAA GVLGTCELLL
RAQSNNTISN LPSELGSNLG NDGDTFAIRT ELDEKTNPHL GGPGAIAILN YENPIRPAIM
MRAPLTKFDR LFPDHNAIGT FIFSNSHHRG RLTFNKDTNG LDIEYELDYD AISASQALLD
RFQQANGGEI IPPDVQITGH QLGGAAMGSV CDSFGRVQGQ KGLYVVDGSL IPGSSTCMNP
ALTIAAVAER ALQNIIQEDI LV
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