Gene Syncc9605_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0826 
Symbol 
ID3735389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp795607 
End bp797115 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content44% 
IMG OID637775423 
Productcholesterol oxidase 
Protein accessionYP_381149 
Protein GI78212370 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.492238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.40216e-05 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAACACT CACCTGCTAT CGTCATCGGA AGTGGATTCG GTGGGTCTGT TGCTGCCCTG 
CGGCTTGCTG AGGCTGGCAT CAAAACGCTT GTTATTGAGC GAGGTAAACG TTGGACCATC
CAGGATCCAA CAGTCAACGA AACCTTCAGT ACTTTTGACA GTCTTGATGG TCGTGCTGAG
TGGTTGAATG ATACTGGACG CTCAGAAACT CCTGCTTATG AAGGATTACC TATAACCAAG
CACACAGGAA TTATGGAATG TGTGAAGCAT GGTAAGTATA CTTTTTTGGT GGGTGCTGCT
GTCGGCGGTG GATCTCATTG TTATGGAGGG ATTCTGATTG AACCTCCCGA GGAGCTCTGG
AATAATCAAA TACCAATGAT TGATTATTCT GAAATGCGAG ATACGTACTT TCCAGTTGTT
CATAAGACAA TCGGCTCTTC ACCGATTCCT GATGATATTC TAAATTCTGA ATATTATTTA
GGATTAAGGT CGCTTGTTTC TCAGGCAGAA AAGGCTGGTT TTACGGAATG CAGTAGTACC
AACAATGGAA TGAAAGATGG TTATGTTAGA TTTAAGATGG GAATTGATTG GGATGCCACA
AGGGAAGAAA TTGCTAATAA ACGTGTGGCT TCACAGATTA AAGCTGAGTT CTGGTTTGGC
CAAAATAGCG GTGCTAAGCA AACTTTAGAC ACTAACTATC TAAAACTTGC CGAAGAAACT
GGATCAGTCG AGATCAGACC TCTTCATCTT GTCAATTCGA TTTCAGAGAA CGAAGATGGA
TTATACATCA TAGAAACATC GCGAATCAAC ACCAAGGGCG ATGTGATTGA GACGAAGCTT
TTTAGTTGCA ACCAATTGTT TTTGGCGGCT GGTGTTCTTG GCACCTGTGA GCTCCTCTTG
AGAGCACAAT CCAACAACAC AATTTCCAAT CTACCCTCTG AGCTTGGTTC CAACCTTGGC
AACGACGGAG ATACTTTTGC AATACGTACT GAACTTGATG AAAAAACCAA TCCCCATCTT
GGCGGACCTG GTGCTATTGC CATTTTGAAC TATGAGAATC CCATAAGACC CGCCATCATG
ATGCGCGCAC CACTTACCAA GTTTGATCGC TTGTTTCCCG ATCATAATGC TATTGGGACT
TTTATCTTTT CAAACTCTCA TCACCGCGGT CGCCTAACTT TTAATAAAGA TACCAATGGT
CTTGATATCG AATATGAGCT TGATTATGAT GCTATTTCAG CATCACAAGC GTTGCTCGAT
CGCTTCCAAC AGGCTAATGG TGGGGAGATT ATTCCTCCTG ATGTTCAAAT TACTGGTCAT
CAACTTGGAG GAGCTGCAAT GGGTAGTGTC TGTGATTCTT TTGGACGTGT CCAGGGTCAG
AAGGGCTTGT ATGTCGTTGA TGGATCTCTA ATTCCAGGTT CCAGTACCTG TATGAATCCA
GCTCTTACGA TTGCTGCAGT GGCCGAACGT GCTCTGCAGA ACATTATCCA GGAGGACATT
TTGGTTTAA
 
Protein sequence
MEHSPAIVIG SGFGGSVAAL RLAEAGIKTL VIERGKRWTI QDPTVNETFS TFDSLDGRAE 
WLNDTGRSET PAYEGLPITK HTGIMECVKH GKYTFLVGAA VGGGSHCYGG ILIEPPEELW
NNQIPMIDYS EMRDTYFPVV HKTIGSSPIP DDILNSEYYL GLRSLVSQAE KAGFTECSST
NNGMKDGYVR FKMGIDWDAT REEIANKRVA SQIKAEFWFG QNSGAKQTLD TNYLKLAEET
GSVEIRPLHL VNSISENEDG LYIIETSRIN TKGDVIETKL FSCNQLFLAA GVLGTCELLL
RAQSNNTISN LPSELGSNLG NDGDTFAIRT ELDEKTNPHL GGPGAIAILN YENPIRPAIM
MRAPLTKFDR LFPDHNAIGT FIFSNSHHRG RLTFNKDTNG LDIEYELDYD AISASQALLD
RFQQANGGEI IPPDVQITGH QLGGAAMGSV CDSFGRVQGQ KGLYVVDGSL IPGSSTCMNP
ALTIAAVAER ALQNIIQEDI LV