Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0820 |
Symbol | |
ID | 3735383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 789329 |
End bp | 791098 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637775417 |
Product | thiamine pyrophosphate-requiring enzyme |
Protein accession | YP_381143 |
Protein GI | 78212364 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.155153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000131955 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCGCCTT ACAGGGCGCC TCATCGCTCA CCCCATTCTT ATTTCACTAT GAAAGGCCAT GAGGCAATCC TGAGGCAATT TCTTGCCAAC GGAATGGACC ATATGTTTGG AAATCCTGGG ACAGTTGAGC AGGGATTTCT TGATGCTCTG GCTGATGTGC CAGAGATGAA ATACATTCTC ACCTTGCAAG AGTCTATTGC TGTGCTGTGT GCAGATGGAT ATGCGAGGGC ACGATTGAAA CCTGCTCTTG TTCAGATTCA CAGTTCACCT GGACTAGGGA ACGCCATTGG TAATCTTTAT CAAGCCATGC GTGGGCAGGC TCCACTCGTT GTTATTGGGG GAGATGCTGG TATTAAATAT CAAGCGATGG ATGCCCAGAT GGCTGCAGAT CTGGTTGCAA TGGCAGAGCC AGTGACAAAG TGGTCTGCAA TGGTTCAACA TCCATCCAGT CTTTTGAGGA TGGTTCGCCG TGCTATCAAG GTTGCAGCAA CACCTCCCTG TGGACCTGTT TATCTTTGCC TCCCTGAAGA CATTCTGGAT GCTGAAATTA CGGAGAAAAT AATCCCCGCT CATATCCCAA GCCTTGAAAC ATGTCCAGGC TCGCTGGATT TGGACCGTAT GGTTTCTGCA ATTCAGTCAG CACAGAACCC CATTATTTTG GTTGGCGATG GTGTGGCCTG GACCGGAGGT GTTGAAAAAA TTGTTGATCT TGCAGAAACA CTCGGCGCCA AGGTTTATTC GGCAGATGGT GGTGAAATTA ATTTTCCTGA TGACCACCTA TTAAATTATG GAAGCACTGG GCATATGTTT GGTGATCAGA GTCTTCCGAT CATGCAATCA TGTGATTTAT GTCTTACTTT GGGCTGTTAT TTACTGCCCG AAGTTTTTCC TCATCTCGGT GACATTTTCA ATGAGGATGC CACGATTATT CATGTGGATA CCAACGTTGA TAACATCGCT AAAAACCATA GGGTAGATAT ATCTTATGTG GCTGAACCCC ATTCTGTCGT TACAGGGTTA TTGCCCATTC TTAAATCACT CTCGTCTAGC TGGCACAACG CAGCTCAACA AAGACGATCA AAGCTCGAGT CAGAATCACC TGTAGTTCAT AACAACGTAG ATCAAAATTA TCAAGTTGAA CCTCCGTATC CATCTGAGGC CTATGACGGT ATCAATCGTT CCATGCGTTC CGGATACTTT ATTAAAACAT TGGCAGATAA GCTTCCAAAG GAAACTATTA TATTTGATGA AGCCTTAACC AATTCACCTC CGGTGAATCG CTACCTTCCT GGCCAAAAAC CCGGTGATCG TATGTTGACG CGTGGGGGTT CCCTCGGTAC AGGATTTCCA GGCGCCATTG GCGCAAAAAT AGCCTACCCC GATCGATGTG TTATTGGCTT TTCCGGTGAT GGGGGGAGTA TGTACACCAT TCAGTGTTTG TGGACTGCAG TAAGGCATAA TGTTGCAGCA AAATTTATTG TTTGTCAAAA TCGATCATAC AAACTTCTTC AGTCCAATAT CTCAAAATTC TGGCAAGAAC GTGGAATTGA AGGTAGAGAG TTTCCAGTAC CCTTTGATTT ATCAAAACCT GAAATTTGCT TCAGTGTGAT AGCTAATAGT TTTGGTGTGA GTGGAGAACG TGTTGTTAGG CCAGATCAAG TTGGAGAAGC AATTGATAGG ATGCTCAACC ATGATGGTCC CTACCTAATT AATCTAGTTC TCGATGGAGA TATCAGACCT GATTTGATTG GCGTACGCTG CGGTCAGTGA
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Protein sequence | MAPYRAPHRS PHSYFTMKGH EAILRQFLAN GMDHMFGNPG TVEQGFLDAL ADVPEMKYIL TLQESIAVLC ADGYARARLK PALVQIHSSP GLGNAIGNLY QAMRGQAPLV VIGGDAGIKY QAMDAQMAAD LVAMAEPVTK WSAMVQHPSS LLRMVRRAIK VAATPPCGPV YLCLPEDILD AEITEKIIPA HIPSLETCPG SLDLDRMVSA IQSAQNPIIL VGDGVAWTGG VEKIVDLAET LGAKVYSADG GEINFPDDHL LNYGSTGHMF GDQSLPIMQS CDLCLTLGCY LLPEVFPHLG DIFNEDATII HVDTNVDNIA KNHRVDISYV AEPHSVVTGL LPILKSLSSS WHNAAQQRRS KLESESPVVH NNVDQNYQVE PPYPSEAYDG INRSMRSGYF IKTLADKLPK ETIIFDEALT NSPPVNRYLP GQKPGDRMLT RGGSLGTGFP GAIGAKIAYP DRCVIGFSGD GGSMYTIQCL WTAVRHNVAA KFIVCQNRSY KLLQSNISKF WQERGIEGRE FPVPFDLSKP EICFSVIANS FGVSGERVVR PDQVGEAIDR MLNHDGPYLI NLVLDGDIRP DLIGVRCGQ
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