Gene Syncc9605_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0817 
Symbol 
ID3735380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp785163 
End bp786566 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content41% 
IMG OID637775414 
Producthypothetical protein 
Protein accessionYP_381140 
Protein GI78212361 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID[TIGR02466] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00165108 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.2103e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACAGCAG GTAATACCTC CAACAATAGA AAGGGTGTGC AGGCTGCGAT GGCAGGTAAC 
CATATTGAAG CAGAAAACTT CTTTCGCCAA GCAATCAAAG AAAGTGATAC GGCCATCGAA
GGCAGCATGA ATCTTGTCAG ATTGCTGCAC ATGCAAGGAA GACATGCCGA GACAATTAGA
GCATTTGAAG AGCTTCAAAC AAAAGCTCAA ATAGAAAAGA TACATCCACA AATTTTGTAT
ATGGTCACTC AGAGTGCCCT AGATCTAGGT GACCAGAAAA CGGCATTACG GAACCTCAGA
GTACTAGCAC CACAGAATCC CAAGAATAGT GAGATACAGT GCATGCTGTC CAAGATATTG
ATCGAAAGCG GGCGTCTCGT GGAGTCTAAA AAAGTTCTTG AGCAGGCAAT GCTAGTCAAC
CCAGATGATC CTAGTATTGC TACACAATTG GCCATTACAC AGAGTGAGCT TGGAAACTAC
GATAAGGCAG AGATACTCCA CAAAAGGCTT ACACAGAAAT ATAGAAATGC CTTTTTAAGT
CACTTCAACT ATGGTCTTTT TTTAGTCAAC ATTGGTGAAC GGGAAAGAGC ATTAAGTTGC
TTTATACGAT GCCAGCAAAT TGTTCCAAAT GCACCTGAGG CGCAGGAGCA AATCGAGAAA
TTACTTCAGA GTGACAAAAA TTGTCTGACA GCAATTTATC AAGATATTGA AAAAGAACAT
TGGGGTGAGG CCGAAAGAAG GCTTAGAGAA AATGAAGGGT TAATAGAGCC AATTGAGTTC
TGGGCTGCGG TTAATGAGCT ACCAAAAGAA AATCAGGAAA AACTAGGAGG TATTGAAGCT
TTTGATTCGG AAGTTCAGAT TAAAACAGTT GAACTTTATT CCGCTTTTGA GAGAAAAAAG
TGTTTGGAAG ATCTTATCGA TACTGTAAAA AATACAGAGA GTTTGATATG GAATCGAGCT
GGAAAACCAA CCCGGTATGG ACTGCAAAGT CATGAAATAT TAAAAGAAAG TCAATCAAAA
TATATCCAGG ATTTATGTAT ACGTCTTAAT GGAGCAGCAA GAGCATACAT GGAGAATAAA
CCACTTCTGC AGAAGATCAG AGATCAGAAA AAGGGCAATC TAGAACTGAG CGGTTGGTGT
GTGGTACTAA AAAAAGGAGG TCACCAAAAA CGCCATATCC ATCCAGAATC CCTCGTCAGT
GGAGTCGTTT ATATCAAATT ACCATCAGAA TCTGCTGATG AGCAAAAGAA AGAAGGGAAC
TTGGTGTTCC CATCAAACAA TATGAAAATG GTCACCCCCA AAGAAGGTAT GGCTGTTCTC
TTCCCCAGTT ACCTCCCCCA TGAAACGGTT CCGATTAGCA GCGATGATGA ACGGATCTGT
ATAGCTTTTA ACTTAATCAA ATGA
 
Protein sequence
MTAGNTSNNR KGVQAAMAGN HIEAENFFRQ AIKESDTAIE GSMNLVRLLH MQGRHAETIR 
AFEELQTKAQ IEKIHPQILY MVTQSALDLG DQKTALRNLR VLAPQNPKNS EIQCMLSKIL
IESGRLVESK KVLEQAMLVN PDDPSIATQL AITQSELGNY DKAEILHKRL TQKYRNAFLS
HFNYGLFLVN IGERERALSC FIRCQQIVPN APEAQEQIEK LLQSDKNCLT AIYQDIEKEH
WGEAERRLRE NEGLIEPIEF WAAVNELPKE NQEKLGGIEA FDSEVQIKTV ELYSAFERKK
CLEDLIDTVK NTESLIWNRA GKPTRYGLQS HEILKESQSK YIQDLCIRLN GAARAYMENK
PLLQKIRDQK KGNLELSGWC VVLKKGGHQK RHIHPESLVS GVVYIKLPSE SADEQKKEGN
LVFPSNNMKM VTPKEGMAVL FPSYLPHETV PISSDDERIC IAFNLIK