| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0815 |
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| Symbol | |
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| ID | 3735378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 780710 |
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| End bp | 782875 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637775412 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_381138 |
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| Protein GI | 78212359 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000104975 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGATTA GCGCTCCTCC TGTCATTGCA TCGCTTAGGG GCAATCCGCT CGAACCACAG
GGCACAGCAT TTCGTCGTTA CACCGGGTCT CCTCACCCTT TTGGAAGCAC CGTCGAAGCA
GACGGCGTGA ACTTTTCTCT GTTCAGCGGC AGTGCTACTG GGGTTCAACT GCTGATTTTC
ACTCGACCTG AAGACCTTGA GCCGGTCAAG GTCATTACCC TCAGTGCGAC TGAAAACAGA
AGCTTCAACA TCTGGCATGC CTTCATCGAA GGCGTCAAAC CTGGCATGGG CTATGCCTAC
CGGGTGGACG GTCCCCGTGA ACCCTGGAAC GGCCATCGCT TCGATCCAGA GAAGGTTCTT
GTCGATCCGT ATTCCAAAGG AAACAGTCTG GCCCTTTGGA ATCGCGGAGC TGCCTGCACA
CCTGGGAACA ACCTGCACAG CAGCATGCGC AGCGTTGTTA TCGACACCGG CGACTACGAC
TGGGAAGGGG ATCAGCCCCT GAAACGCCCG ATGGCCGATA CGGTTGTTTA TGAAATGCAT
GTCGGGGGCT TTACCAAGAG TCCGACCAGT GGCGTTAAAC ATCCAGGCAC TTATCTGGGA
CTGATCGAAA AAATTCCTTA TCTGAAAAGT CTTGGTGTCA CGGCTGTCGA GCTTCTTCCC
TGCTTCAGCT TCGACCACAC AGATGTCACC AAGGAACATG AAGGCCGCAA ATTAGTGAAC
TATTGGGGCT ATAGCACCAT GGGCTATTTC GCGCCTCACC AGGGTTATTG CGTAAGCGCG
GATGTAGGAA CTCATATCAA GGAGTTCCGT GACATGGTGA AAGCTCTACA CAATGCAGGA
ATCGAAGTGA TCCTTGATGT GGTTTACAAC CATACGGATG AGGGTAATCA TCAGGGGCCG
ATGTTCAGCT TCAGGGGAAT TGATAATTCA ACATATTACT ATCTGACTGG TGCTAATGGA
TCAAAAGAGT ATTACTACGA CTACACAGGA TGTGGCAACA CATTTAACTG TAATCATCCC
GTTGGCGAAA AGCTGATTCT CGATTCACTA AGGTTTTGGG TGGATGAGAT GCATGTTGAT
GGTTTCCGAT TCGATGAAGG TTCTGTGTTG AGTCGAGGCG AAGACGGTTC TCCATTAGAG
CATCCTCCAG TGATTTGGGC GATTGAACTC GACGATATTC TTGGCAAGAG CAAGGTGATT
GCTGAAGCTT GGGATGCTGC AGGTCTGTAC CAAATTGGTT ATTTTCCAGG AGCGCGATGG
GCCGAGTGGA ACGGTAAATA CAGGGATTGC ATTCGTCGTT TTATTAAAGG TGATGCGGGC
ATCATCAGTG AGGTGGCCTC ACGCATAACG GGCAGTGCAG ATCTCTATCA GTGGCACCAC
CATGAACCTG TCAATAGTGT GAACTTCGTC ACGGCACATG ATGGATTTAC TCTTTATGAT
TTAACTGCGT ATAACGAAAA GCATAACTGG GCGAATGGGG AAGATAATAA CGACGGAATT
GATGAAAATT TAAGTTGGAA TTGTGGCGTC GAGGGCGAGA CTGACGATCA ATGGATTAAT
GATATGAGAA AAAGGCAGGT CAAGAACTTT GCCGCAATTC ATATGCTTTC TATGGGTGTG
CCCATGATTG TTGGTGGAGA TGAATACATG CGGAGCCAAG GTGGCAACAA CAACACCTAT
TGCCATGATA ACGAGATCAA TTGGTATAAC TGGGATCAGA TTGAATCAAA AGAAAGTCAG
GAGATGATTC GATTCTGGTC ACTCCTAATT GGGAAAAGAA AAATGTATAT TGACCATTTC
CGTGGTCGTT ATTTCACAGG TGAATCAAAC AAGTTCGGGC TTTCCGATAT TAGCTGGCAT
GGTACGCAAT TGAACAATCC AGGCTGGGAC AACAGTGAAG CTCGATGTCT TGCGATGACC
CTTGGAGACA CGGCGGAGGA TACAGATCAG ACTCACAATG TTCACGTTAT GTTCAACATG
TTTTGGGATG CCATCGAATT TGAAATTCCT CAAATTCCTG GCTTAGTCTG GTATCGAGCA
ATAGATACTG CTTTGCCTTC ACCTCAGGAC ATCGCGTCTC CCGATCAGCA GGTTGCTGTT
CAAGGAAACA GCTATTTGGT AACTGGCCGC AGCATCGTGA CGCTCGTCTC TCGGGCGTCG
ACATAA
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| Protein sequence | MTISAPPVIA SLRGNPLEPQ GTAFRRYTGS PHPFGSTVEA DGVNFSLFSG SATGVQLLIF
TRPEDLEPVK VITLSATENR SFNIWHAFIE GVKPGMGYAY RVDGPREPWN GHRFDPEKVL
VDPYSKGNSL ALWNRGAACT PGNNLHSSMR SVVIDTGDYD WEGDQPLKRP MADTVVYEMH
VGGFTKSPTS GVKHPGTYLG LIEKIPYLKS LGVTAVELLP CFSFDHTDVT KEHEGRKLVN
YWGYSTMGYF APHQGYCVSA DVGTHIKEFR DMVKALHNAG IEVILDVVYN HTDEGNHQGP
MFSFRGIDNS TYYYLTGANG SKEYYYDYTG CGNTFNCNHP VGEKLILDSL RFWVDEMHVD
GFRFDEGSVL SRGEDGSPLE HPPVIWAIEL DDILGKSKVI AEAWDAAGLY QIGYFPGARW
AEWNGKYRDC IRRFIKGDAG IISEVASRIT GSADLYQWHH HEPVNSVNFV TAHDGFTLYD
LTAYNEKHNW ANGEDNNDGI DENLSWNCGV EGETDDQWIN DMRKRQVKNF AAIHMLSMGV
PMIVGGDEYM RSQGGNNNTY CHDNEINWYN WDQIESKESQ EMIRFWSLLI GKRKMYIDHF
RGRYFTGESN KFGLSDISWH GTQLNNPGWD NSEARCLAMT LGDTAEDTDQ THNVHVMFNM
FWDAIEFEIP QIPGLVWYRA IDTALPSPQD IASPDQQVAV QGNSYLVTGR SIVTLVSRAS
T
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