Gene Syncc9605_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0804 
Symbol 
ID3737315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp767897 
End bp769234 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content64% 
IMG OID637775400 
Productsun protein 
Protein accessionYP_381127 
Protein GI78212348 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0103148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTTT TGTCTGATTC GGCTCCGATT GGACTGCTGC CGCGCCGTCT CGCCTGGGAT 
GTTTTGCAGG CGGTTGCGGC TGGGGCCTAT GCCGATGTGG CGCTGGAGCG GGTGCTGCGG
GAGCGGGACC TCAAGCCTTC GGATCGGGGA TTGGTGACCG AGCTGGCCTA TGGCGCGATC
CGCCAACGGC GCACTCTTGA TGCCTGGCTG GATCGGCTGG GCAAGGTGCC GGCGTTGAAG
CAGCCGCCCA AGCTGCGCTG GCTTTTGCAT GTGGGGCTCT ATCAACTGCT GTTGATGGAG
CGGATTCCAG ATTCAGCAGC GGTGAACACC GCTGTGGAGT TAGCCAAAAC CAGCAAGGGA
TTGGCCCGAC TGGCCCCTGT GGTGAACGGG GTTCTGCGGG CGGCGTTGCG GGCGCGTGAG
GCCGGCGAAA CCCTGCAATT GCCCAACGAT CTGCCGGCTC AGCTGGCCCT GGCCCATTCC
CTGCCGGATT GGTTCACCCA GTTGTTGATC GAGTGGCGCG GGGTGGAGGG GGCCGCGGCG
GTGGCAAGCG CCTGCAACCG CGTACCGGAT CTGGATTTGC GGGTGAATCG GTTGCGATCG
AGTCCTGCGC AGGTGCAGCA GGATCTGGCT GCGGCTGGCA TCAGCAGTGA GTCCATCGTT
GGTTGTCCCG ATGGCCTGCG CATCTCAGGC CACAGCGGCG ATCTGCGCCA CTGGCCCGGC
TATGCCGAGG GCCATTGGTG TGTGCAGGAT TGTTCGGCGC AATGGATTGC ACCTGTGCTC
GATCCCAAAC CGGGAGATCG CATCCTGGAT GCCTGTGCGG CTCCGGGGGG CAAAGCCACC
CATTTAGCGG AGTTGGTGGG GGATCAGGCG GAGATCTGGG CTGTGGACCG ATCAGCGGGA
CGGCTCAAGC GCGTTGCGGC CAATGCCGCC CGGCTGGGCC TTGCCTCCAT CAATGCCCTG
GCTGCGGATG CCGCCAATCT TTTGGAGCAG CGCCCCCAAT GGCGTGAATC CTTCCAGAGG
ATCCTGATCG ATGCCCCCTG CTCGGGGCTT GGAACCCTGG CCCGTCATCC CGATGCCCGT
TGGCGGGTGA CGCCCCAATC CATTCGTGGT CTTTTGCCCC AACAACAGGC TCTTCTGGAT
GGCCTTCTGC CGTTGTTGGC TCCCCAAGGA GTGTTGGTGT ACGCCACCTG CACCATTCAT
CCCGATGAAA ATCAGGCACA GATCCAGGCT CTGTTGAAGC GTCACCCAAC GCTGCGTTTG
GAACAGGAGA GCCAGCTCTG GCCGGATCAA GCCAGCGGGG GAGATGGGTT CTATTCGGCG
GTGCTGCAGC GGGCCTAG
 
Protein sequence
MLLLSDSAPI GLLPRRLAWD VLQAVAAGAY ADVALERVLR ERDLKPSDRG LVTELAYGAI 
RQRRTLDAWL DRLGKVPALK QPPKLRWLLH VGLYQLLLME RIPDSAAVNT AVELAKTSKG
LARLAPVVNG VLRAALRARE AGETLQLPND LPAQLALAHS LPDWFTQLLI EWRGVEGAAA
VASACNRVPD LDLRVNRLRS SPAQVQQDLA AAGISSESIV GCPDGLRISG HSGDLRHWPG
YAEGHWCVQD CSAQWIAPVL DPKPGDRILD ACAAPGGKAT HLAELVGDQA EIWAVDRSAG
RLKRVAANAA RLGLASINAL AADAANLLEQ RPQWRESFQR ILIDAPCSGL GTLARHPDAR
WRVTPQSIRG LLPQQQALLD GLLPLLAPQG VLVYATCTIH PDENQAQIQA LLKRHPTLRL
EQESQLWPDQ ASGGDGFYSA VLQRA