Gene Syncc9605_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0560 
Symbol 
ID3737662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp543406 
End bp544149 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content45% 
IMG OID637775158 
Producthypothetical protein 
Protein accessionYP_380889 
Protein GI78212110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000015022 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.421811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTATATA CTCAAACAAC CAAGAGAAGA CTTAAGCGAG TGAAAAAACA AATTCTTGCC 
GCCACTACCC TTCTTCTTCT TGGATCGGGA AGCGCATTAG CAGGAACTTA TGACGCTCTA
TGCGGAGACA TGGAATGCCA GATCTCAGTA AGCGGGAAGG GGGTAAGTAG CCCTGCAGGT
TTTACACCCA TAGATCTGAT ATCACAGTGG AATGTCGGCA AGGCATCTGA TTACAACGCA
GGCAAAGGTG TTGCAGGCGG CCTTGGCGGA GCCACTGCAG GAGCAATAGG AGGAGCGGTG
TTACTCGGCC CTATAGGCCT CTTAGGCGGA CTAATTGGTG GAGCAATTGC AGGAGCTGAT
GCAGGCAAAG AATTTGAGGG TTATTTTACA ATCGTTGGAT ACAATAAAAA AGGAGAAAAG
ATTGCTCATA ATTTCTTCTT CATTAATCGC AAGCCTGTCA AAAGATTACT CTCTGAGTTG
CCACTTATAA CTGGTCTTGC CTTAGGAGAG GAACGGGATC TTAGCGAGAT AGAAGCCGCA
TTTTCAGGAC AAAGCAAAAG TACAAACGCC AAAGAAAATC TTCCTTCAAG GCTTGGTCAA
ACGAAGACAG CTGCTAAAAA AGATAAGTGC TGGGAGGACT TCCTCAACTC GAATCCTGCA
ATGGCGGTGT GGGCGAACAA TAACCCTCAG CTAGCTGATA AACAAAGAGT TAAAAGTGGA
TATAACTTAT GCGAAAAAAA TTAA
 
Protein sequence
MLYTQTTKRR LKRVKKQILA ATTLLLLGSG SALAGTYDAL CGDMECQISV SGKGVSSPAG 
FTPIDLISQW NVGKASDYNA GKGVAGGLGG ATAGAIGGAV LLGPIGLLGG LIGGAIAGAD
AGKEFEGYFT IVGYNKKGEK IAHNFFFINR KPVKRLLSEL PLITGLALGE ERDLSEIEAA
FSGQSKSTNA KENLPSRLGQ TKTAAKKDKC WEDFLNSNPA MAVWANNNPQ LADKQRVKSG
YNLCEKN