Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0560 |
Symbol | |
ID | 3737662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 543406 |
End bp | 544149 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637775158 |
Product | hypothetical protein |
Protein accession | YP_380889 |
Protein GI | 78212110 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000015022 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.421811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTATATA CTCAAACAAC CAAGAGAAGA CTTAAGCGAG TGAAAAAACA AATTCTTGCC GCCACTACCC TTCTTCTTCT TGGATCGGGA AGCGCATTAG CAGGAACTTA TGACGCTCTA TGCGGAGACA TGGAATGCCA GATCTCAGTA AGCGGGAAGG GGGTAAGTAG CCCTGCAGGT TTTACACCCA TAGATCTGAT ATCACAGTGG AATGTCGGCA AGGCATCTGA TTACAACGCA GGCAAAGGTG TTGCAGGCGG CCTTGGCGGA GCCACTGCAG GAGCAATAGG AGGAGCGGTG TTACTCGGCC CTATAGGCCT CTTAGGCGGA CTAATTGGTG GAGCAATTGC AGGAGCTGAT GCAGGCAAAG AATTTGAGGG TTATTTTACA ATCGTTGGAT ACAATAAAAA AGGAGAAAAG ATTGCTCATA ATTTCTTCTT CATTAATCGC AAGCCTGTCA AAAGATTACT CTCTGAGTTG CCACTTATAA CTGGTCTTGC CTTAGGAGAG GAACGGGATC TTAGCGAGAT AGAAGCCGCA TTTTCAGGAC AAAGCAAAAG TACAAACGCC AAAGAAAATC TTCCTTCAAG GCTTGGTCAA ACGAAGACAG CTGCTAAAAA AGATAAGTGC TGGGAGGACT TCCTCAACTC GAATCCTGCA ATGGCGGTGT GGGCGAACAA TAACCCTCAG CTAGCTGATA AACAAAGAGT TAAAAGTGGA TATAACTTAT GCGAAAAAAA TTAA
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Protein sequence | MLYTQTTKRR LKRVKKQILA ATTLLLLGSG SALAGTYDAL CGDMECQISV SGKGVSSPAG FTPIDLISQW NVGKASDYNA GKGVAGGLGG ATAGAIGGAV LLGPIGLLGG LIGGAIAGAD AGKEFEGYFT IVGYNKKGEK IAHNFFFINR KPVKRLLSEL PLITGLALGE ERDLSEIEAA FSGQSKSTNA KENLPSRLGQ TKTAAKKDKC WEDFLNSNPA MAVWANNNPQ LADKQRVKSG YNLCEKN
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