| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0521 |
|---|
| Symbol | |
|---|
| ID | 3736766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 513856 |
|---|
| End bp | 514239 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637775119 |
|---|
| Product | carboxymuconolactone decarboxylase family protein |
|---|
| Protein accession | YP_380850 |
|---|
| Protein GI | 78212071 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.66457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCG CTGAGTATAT AAACGGCATG AACGAAATGC GATCTCACTT TGGAGATGCA
GCTGACGATT GGATTGCCGC AATTCATGAT ATTTATCCAG AATTTGCCAA AGTCAATGTT
GAGTTTCCCT TTGGCGAGCT TTACCGAAGA GATGTCCTGG ACGACAAAAC GCGTGAGCTT
TGCACAGTAG CTGCTCTAAC AGTTCAAGGA TTCGCCTTAC CAGAACTCAA GGTTCACGTC
AAAGGGGCCC TTAATACCGG AAGCAGTCGA GCTGAGATTC TTGAAATCAT CACGCAGATG
ATTGCGTATT GTGGATTTCC CGCTGCAACC AACGCTTTAC TCGCCACGAA GGAAGTATTT
GATGAGATCG ATTCGACAAA ATGA
|
|---|
| Protein sequence | MASAEYINGM NEMRSHFGDA ADDWIAAIHD IYPEFAKVNV EFPFGELYRR DVLDDKTREL
CTVAALTVQG FALPELKVHV KGALNTGSSR AEILEIITQM IAYCGFPAAT NALLATKEVF
DEIDSTK
|
|---|
| |