Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0487 |
Symbol | |
ID | 3736929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 471664 |
End bp | 473121 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637775078 |
Product | putative neutral invertase-like protein |
Protein accession | YP_380816 |
Protein GI | 78212037 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.782741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.616343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAACGC GTTTCACCGA ACAAAGCCAG CGCTTCCGCC CCAACTCAAA TGAAGGGCAG GTGCTGCAAA AGGCACGGGA ACACTTCGAA GCCACGCTGA TTGGCGTTCA AGGCGAACTC GCCGGCAGCG TTGCCGCGAT GGAACATCGC CGCTCTGACG ACGCCCTCAA CTACGGCGAG ATCTTCCTGC GGGACAACGT TCCAGTGATG ATCTACCTGA TGCTGGAAGG CCGCTTCGCC ATCGTGAAGC AGTTCCTGAG CGTCAGCCTT CAGCTCCAAA GCACCAACGT TCAAACCCGC GGTGTCTTCC CCACCAGTTT TGTGGAGGAA GAGGGAGAAC TGGTTGCGGA CTACGGCCAA CGCTCGATTG GTCGAATCAC CTCAGTGGAT GCAAGCCTCT GGTGGCCGAT TCTCTGCTGG ATTTACGTCA AACGCAGTGG GGACGTCGAC TTTGGCCGGA GTCCTGAGGT GCAACGGGGG TTGCAACTGC TGCTGGATCT GGTTCTTCAC CCCAGCTTCG AAGGCACACC AGTGCTGTTC GTTCCTGACT GCGCCTTCAT GATTGACCGC CCCATGGATG TGTGGGGAGC TCCACTGGAG GTGGAGGTGC TGCTTTTTGC AGCGCTGCGC AGCTGCGTTG GGCTGATGGA ACTCTGCCAA CGCCATGAGA ACAGCGTTCT TCTGGCGGAA CGACTGCGGC TGAGCCGGCA GTGGACCCAT GACTTGCGGC AGTTCCTGCT GAAGCACTAC TGGGTGACCA GCAAAACAAT GCAAGTGCTT CGGCGACGGC CAACGGAGCA GTACGGCGAA AACCAGCACC ACAACGAGTT CAACGTTCAA CCCCAGGTCA TCCCCGACTG GTTGCAGGAC TGGCTGGAGA ACCGTGGCGG TTACATGATC GGGAACATGC GAACCGGACG ACCGGATTTT CGCTTCTACT CCTTGGGGAA TTCCCTGGCA TCACTGTTCG GGTTGCTGAC TGCACCACAG CAACGGGCCC TGTTCCGACT GGTACTGCAC AACCGGGATC ACCTGATGGC CCAGATGCCG ATGCGCATCT GTCACCCCCC CATGGAGGGC GTGGAATGGG AGAACAAAAC GGGTTCCGAT CCCAAAAACT GGCCCTGGAG CTATCACAAT GGAGGCCACT GGCCGAGCCT GCTCTGGTTT TTTGGAGCGT CCATCCTTCT GCACGAACGC CTGAATCCCC AGGCCGACGT GTTGCTGATG GGACAGATGA AAACGTTGAT GGACGAGTGC TACTGGAGCC ACCTCAACCA GCTGCCTCGT CAGCAATGGG CTGAATATTT CGACGGCCCC ACGGGAACCT GGGTTGGGCA ACAGTCACGC ACGTATCAGA CCTGGACCAT CGTTGGCTTT CTGCTGATGC ACCACTTTCT CCACATCAAC CCAGACGACG TGTTGATGCT CAACCTCGAC GAATCGATGG GTCACTGA
|
Protein sequence | MPTRFTEQSQ RFRPNSNEGQ VLQKAREHFE ATLIGVQGEL AGSVAAMEHR RSDDALNYGE IFLRDNVPVM IYLMLEGRFA IVKQFLSVSL QLQSTNVQTR GVFPTSFVEE EGELVADYGQ RSIGRITSVD ASLWWPILCW IYVKRSGDVD FGRSPEVQRG LQLLLDLVLH PSFEGTPVLF VPDCAFMIDR PMDVWGAPLE VEVLLFAALR SCVGLMELCQ RHENSVLLAE RLRLSRQWTH DLRQFLLKHY WVTSKTMQVL RRRPTEQYGE NQHHNEFNVQ PQVIPDWLQD WLENRGGYMI GNMRTGRPDF RFYSLGNSLA SLFGLLTAPQ QRALFRLVLH NRDHLMAQMP MRICHPPMEG VEWENKTGSD PKNWPWSYHN GGHWPSLLWF FGASILLHER LNPQADVLLM GQMKTLMDEC YWSHLNQLPR QQWAEYFDGP TGTWVGQQSR TYQTWTIVGF LLMHHFLHIN PDDVLMLNLD ESMGH
|
| |