Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0407 |
Symbol | |
ID | 3736729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 408463 |
End bp | 409107 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637774996 |
Product | 3'-5' exonuclease |
Protein accession | YP_380738 |
Protein GI | 78211959 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.23143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.475558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA AGTCGTCATC CCCAGCGGAA TTCGCGGTCT TTGATCGCGA TCTCGATGCA GCTTGGACGG AGCGCTACCT GCAGTCCCCG CGGCTTGCCG TTGATACCGA AGCGATGGGG CTGATTCATG GGCGTGATCG GCTTTGCCTG GTTCAGATCG CCGACGCCGA GGACCGTGTG GCCTGTGTCC GCATTGGCCT GGGCCAGACC GAGGCACCAA ATCTCAAGCG CCTGTTTGAG GCGCCCACGG TGGAGAAGGT GTTTCACTTC GCCCGTTTCG ATGTGGCTGC GCTTGCTGCC GGTTTGAGCA TCGAAGTGAA CCCCGTGTTC TGCACCAAGG TCGGCAGTCG GCTCGGCCGC ACGTACACCC CCCGCCATGG CCTTAAGGAT CTGGTGATGG AATTGGTCGG CGTTGAGCTG GACAAGGGCG CCCAGAGCAG TGACTGGGGC CGGGTGGACG AACTTACGGA TGCCCAGTTG GCCTACGCCG CCAACGATGT GCGCTATTTG CTGCCAGCCC GCGAGCGCCT GGAGCAAATG TTGCGGCGGG AAGGGCGTTG GGATCTGGCA CAACGCTGCT TTCAATGCGT TCCGGTGGTT GCCGAGCTTG ATCGGCTGCG CTTTCACCAG ATCTTTGAGC ACTGA
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Protein sequence | MAEKSSSPAE FAVFDRDLDA AWTERYLQSP RLAVDTEAMG LIHGRDRLCL VQIADAEDRV ACVRIGLGQT EAPNLKRLFE APTVEKVFHF ARFDVAALAA GLSIEVNPVF CTKVGSRLGR TYTPRHGLKD LVMELVGVEL DKGAQSSDWG RVDELTDAQL AYAANDVRYL LPARERLEQM LRREGRWDLA QRCFQCVPVV AELDRLRFHQ IFEH
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